Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 20 390 NP_858045 20 390 NP_006525 20 390 NP_001167559 20 390 NP_056164 18 1135 XP_005249030 18 1135 XP_005249029 18 1135 NP_001157789 17 2528 XP_005265039 17 2528 XP_005265038 17 2528 XP_005265035 17 2528 XP_005265034 17 2528 NP_056303 16 5631 NP_072094 16 5631 NP_006725 16 5631 XP_005267014 16 5631 NP_203752 16 7355 NP_001139381 16 7355 NP_065829 16 7355 NP_775764 16 7355 NP_008988 16 7355 NP_001005413 16 7355 NP_127490 16 7355 NP_001008395 16 7355 XP_005269520 16 7355 XP_006712877 16 7355 XP_006712876 16 7355 XP_006712875 16 7355 XP_006712874 16 7355 XP_006712873 16 7355 XP_006712872 16 7355 XP_005246976 16 7355 XP_005246975 16 7355 NP_000089 15 9605 NP_001094383 15 9605 NP_056012 15 9605 NP_001269889 15 9605 NP_001269888 15 9605 NP_060707 15 9605 NP_663619 15 9605 NP_001230056 15 9605 NP_055532 15 9605 NP_055501 15 9605 XP_006723575 15 9605 XP_005259502 15 9605 XP_005259501 15 9605 XP_006720155 15 9605 XP_006720154 15 9605 XP_006720153 15 9605 XP_006720152 15 9605 XP_006720151 15 9605 XP_006720150 15 9605 XP_005267520 15 9605 XP_006720149 15 9605 XP_005267519 15 9605 XP_006720148 15 9605 XP_005264418 15 9605 XP_005270541 15 9605 NP_057706 15 9605>NP_001167558 Length = 1423 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAGIMEPMN 9 KAG MEPMN Sbjct: 926 KAGRMEPMN 934>NP_858045 Length = 1424 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAGIMEPMN 9 KAG MEPMN Sbjct: 926 KAGRMEPMN 934>NP_006525 Length = 1420 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAGIMEPMN 9 KAG MEPMN Sbjct: 926 KAGRMEPMN 934>NP_001167559 Length = 1415 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAGIMEPMN 9 KAG MEPMN Sbjct: 921 KAGRMEPMN 929>NP_056164 Length = 1079 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAGIMEPMN 9 K G+ EPMN Sbjct: 866 KTGVTEPMN 874>XP_005249030 Length = 1079 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAGIMEPMN 9 K G+ EPMN Sbjct: 866 KTGVTEPMN 874>XP_005249029 Length = 1079 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAGIMEPMN 9 K G+ EPMN Sbjct: 866 KTGVTEPMN 874>NP_001157789 Length = 2633 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KAGIMEPMN 9 K G++EP+N Sbjct: 1493 KTGLVEPVN 1501>XP_005265039 Length = 2177 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KAGIMEPMN 9 K G++EP+N Sbjct: 1493 KTGLVEPVN 1501>XP_005265038 Length = 2181 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KAGIMEPMN 9 K G++EP+N Sbjct: 1493 KTGLVEPVN 1501>XP_005265035 Length = 2609 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KAGIMEPMN 9 K G++EP+N Sbjct: 1493 KTGLVEPVN 1501>XP_005265034 Length = 2622 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KAGIMEPMN 9 K G++EP+N Sbjct: 1493 KTGLVEPVN 1501>NP_056303 Length = 385 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AGIMEPMN 9 AG++EP N Sbjct: 301 AGVVEPEN 308>NP_072094 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AGIMEPMN 9 AG++EP N Sbjct: 277 AGVVEPEN 284>NP_006725 Length = 2446 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 + GIMEP+ Sbjct: 452 RKGIMEPL 459>XP_005267014 Length = 2446 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 + GIMEP+ Sbjct: 452 RKGIMEPL 459>NP_203752 Length = 1861 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 K G++EP+ Sbjct: 566 KRGVLEPL 573>NP_001139381 Length = 1390 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 K G++EP+ Sbjct: 558 KRGVLEPL 565>NP_065829 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GIMEPMN 9 GI+EPM+ Sbjct: 785 GIIEPMD 791>NP_775764 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 KAGIMEPMN 9 +AG+M+P++ Sbjct: 334 QAGLMDPVD 342>NP_008988 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGIMEPM 8 AGI+EP+ Sbjct: 20 AGILEPV 26>NP_001005413 Length = 230 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGIMEPM 8 AGI+EP+ Sbjct: 20 AGILEPV 26>NP_127490 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGIMEPM 8 AGI+EP+ Sbjct: 20 AGILEPV 26>NP_001008395 Length = 333 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IMEPMN 9 I+EPMN Sbjct: 282 ILEPMN 287>XP_005269520 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGIMEPM 8 AGI+EP+ Sbjct: 20 AGILEPV 26>XP_006712877 Length = 1677 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 K G++EP+ Sbjct: 382 KRGVLEPL 389>XP_006712876 Length = 1783 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 K G++EP+ Sbjct: 488 KRGVLEPL 495>XP_006712875 Length = 1826 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 K G++EP+ Sbjct: 531 KRGVLEPL 538>XP_006712874 Length = 1836 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 K G++EP+ Sbjct: 541 KRGVLEPL 548>XP_006712873 Length = 1861 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 K G++EP+ Sbjct: 566 KRGVLEPL 573>XP_006712872 Length = 1861 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 K G++EP+ Sbjct: 566 KRGVLEPL 573>XP_005246976 Length = 1864 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 K G++EP+ Sbjct: 569 KRGVLEPL 576>XP_005246975 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 KAGIMEPM 8 K G++EP+ Sbjct: 576 KRGVLEPL 583>NP_000089 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KAGIMEP 7 +AG++EP Sbjct: 167 RAGLLEP 173>NP_001094383 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 695 KVGIVEP 701>NP_056012 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 680 KVGIVEP 686>NP_001269889 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KAGIMEP 7 KAG+++P Sbjct: 260 KAGLLQP 266>NP_001269888 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KAGIMEP 7 KAG+++P Sbjct: 260 KAGLLQP 266>NP_060707 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KAGIMEP 7 KAG+++P Sbjct: 275 KAGLLQP 281>NP_663619 Length = 170 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AGIMEPMN 9 +GI+ P+N Sbjct: 14 SGILRPLN 21>NP_001230056 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 605 KVGIVEP 611>NP_055532 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 KAG+ EP Sbjct: 443 KAGLSEP 449>NP_055501 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 KAG M+P Sbjct: 683 KAGAMQP 689>XP_006723575 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 KAG+ EP Sbjct: 443 KAGLSEP 449>XP_005259502 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 KAG+ EP Sbjct: 456 KAGLSEP 462>XP_005259501 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 KAG M+P Sbjct: 683 KAGAMQP 689>XP_006720155 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 672 KVGIVEP 678>XP_006720154 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 685 KVGIVEP 691>XP_006720153 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 696 KVGIVEP 702>XP_006720152 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 681 KVGIVEP 687>XP_006720151 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 685 KVGIVEP 691>XP_006720150 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 688 KVGIVEP 694>XP_005267520 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 691 KVGIVEP 697>XP_006720149 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 692 KVGIVEP 698>XP_005267519 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 695 KVGIVEP 701>XP_006720148 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAGIMEP 7 K GI+EP Sbjct: 696 KVGIVEP 702>XP_005264418 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AGIMEPMN 9 +GI+ P+N Sbjct: 14 SGILRPLN 21>XP_005270541 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 KAGIMEP 7 +AG++EP Sbjct: 167 RAGLLEP 173>NP_057706 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AGIMEPMN 9 +GI+ P+N Sbjct: 14 SGILRPLN 21Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.130 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 644,132 Number of extensions: 1165 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |