Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 19 665 NP_001120972 19 665 XP_006716054 19 665 XP_006716053 19 665 XP_006716052 19 665 XP_006716051 19 665 NP_001002811 17 2528 XP_005276195 17 2528 XP_006711712 17 2528 XP_006711711 17 2528 XP_005277503 17 2528 XP_005273038 17 2528 XP_006711708 17 2528 XP_005277500 17 2528 XP_006711707 17 2528 XP_005277499 17 2528 XP_006711706 17 2528 XP_006711705 17 2528 XP_005277559 17 2528 XP_006710144 17 2528 NP_001138397 17 4312 NP_001269849 17 4312 NP_001171517 17 4312 NP_002453 17 4312 XP_005261039 17 4312 XP_005261038 17 4312 XP_005261037 17 4312 XP_005261036 17 4312 XP_005261035 17 4312 XP_006724068 17 4312 NP_001239586 16 5631 XP_006713052 16 5631 XP_006713051 16 5631 NP_003907 16 7355 NP_001259000 16 7355 NP_001034658 16 7355 NP_003874 16 7355 NP_001274 16 7355 NP_001073878 16 7355 XP_005274671 16 7355 XP_005274669 16 7355 XP_006714865 16 7355 NP_036336 16 7355 NP_055426 15 9605 NP_005422 15 9605 XP_006715467 15 9605>NP_000236 Length = 1390 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 KAFFMLD I Sbjct: 818 KAFFMLDGI 826>NP_001120972 Length = 1408 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 KAFFMLD I Sbjct: 836 KAFFMLDGI 844>XP_006716054 Length = 960 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 KAFFMLD I Sbjct: 388 KAFFMLDGI 396>XP_006716053 Length = 960 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 KAFFMLD I Sbjct: 388 KAFFMLDGI 396>XP_006716052 Length = 1409 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 KAFFMLD I Sbjct: 837 KAFFMLDGI 845>XP_006716051 Length = 1427 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 KAFFMLD I Sbjct: 855 KAFFMLDGI 863>NP_001002811 Length = 1132 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_005276195 Length = 381 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_006711712 Length = 2473 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_006711711 Length = 2482 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_005277503 Length = 2498 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_005273038 Length = 2509 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_006711708 Length = 2512 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_005277500 Length = 2525 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_006711707 Length = 2553 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_005277499 Length = 2561 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_006711706 Length = 2591 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_006711705 Length = 2592 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_005277559 Length = 381 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>XP_006710144 Length = 564 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K FMLDRI Sbjct: 53 KCAFMLDRI 61>NP_001138397 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 K FF++D++ Sbjct: 371 KMFFLIDKV 379>NP_001269849 Length = 508 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 K FF++D++ Sbjct: 371 KMFFLIDKV 379>NP_001171517 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 K FF++D++ Sbjct: 371 KMFFLIDKV 379>NP_002453 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 K FF++D++ Sbjct: 371 KMFFLIDKV 379>XP_005261039 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 K FF++D++ Sbjct: 371 KMFFLIDKV 379>XP_005261038 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 K FF++D++ Sbjct: 371 KMFFLIDKV 379>XP_005261037 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 K FF++D++ Sbjct: 371 KMFFLIDKV 379>XP_005261036 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 K FF++D++ Sbjct: 371 KMFFLIDKV 379>XP_005261035 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 K FF++D++ Sbjct: 371 KMFFLIDKV 379>XP_006724068 Length = 685 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 K FF++D++ Sbjct: 394 KMFFLIDKV 402>NP_001239586 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 KAF+ +DR+ Sbjct: 288 KAFWRMDRL 296>XP_006713052 Length = 396 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 KAF+ +DR+ Sbjct: 288 KAFWRMDRL 296>XP_006713051 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 KAF+ +DR+ Sbjct: 288 KAFWRMDRL 296>NP_003907 Length = 157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KAFFMLD 7 KA+F+LD Sbjct: 108 KAYFILD 114>NP_001259000 Length = 160 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KAFFMLD 7 KA+F+LD Sbjct: 108 KAYFILD 114>NP_001034658 Length = 154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KAFFMLD 7 KA+F+LD Sbjct: 109 KAYFILD 115>NP_003874 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 +AF++ DR+ Sbjct: 179 EAFYLTDRV 187>NP_001274 Length = 158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KAFFMLD 7 KA+F+LD Sbjct: 109 KAYFILD 115>NP_001073878 Length = 864 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAFFMLDRI 9 K+FFML + Sbjct: 180 KSFFMLSHL 188>XP_005274671 Length = 195 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KAFFMLD 7 KA+F+LD Sbjct: 150 KAYFILD 156>XP_005274669 Length = 202 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 KAFFMLD 7 KA+F+LD Sbjct: 150 KAYFILD 156>XP_006714865 Length = 266 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAFFMLDRI 9 +AF++ DR+ Sbjct: 179 EAFYLTDRV 187>NP_036336 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FMLDRI 9 FMLDR+ Sbjct: 145 FMLDRV 150>NP_055426 Length = 5596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FFMLDRI 9 FF+LD I Sbjct: 1464 FFLLDEI 1470>NP_005422 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AFFMLDRI 9 AF+ +DR+ Sbjct: 153 AFYWIDRV 160>XP_006715467 Length = 5550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FFMLDRI 9 FF+LD I Sbjct: 1464 FFLLDEI 1470Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.356 0.161 0.474 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 455,176 Number of extensions: 615 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |