Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 18 1135 NP_653080 18 1135 XP_005267292 18 1135 XP_005267291 18 1135 XP_005267290 18 1135 NP_002728 17 3301 NP_612412 17 3301 XP_006722035 17 3301 XP_005250751 17 3301 XP_006721807 16 5631 NP_001035758 16 7355 NP_065393 16 7355 NP_997404 16 7355 NP_619580 16 7355 XP_005264491 16 7355 NP_001193928 15 9605 NP_055987 15 9605 NP_005425 15 9605 NP_009105 15 9605 XP_005253886 15 9605 XP_006719269 15 9605 XP_005245087 15 9605 XP_005245086 15 9605 XP_005245085 15 9605 XP_005245084 15 9605 XP_006711302 15 9605 XP_005245083 15 9605 XP_005245082 15 9605 XP_005245081 15 9605 XP_005245080 15 9605 XP_005245079 15 9605 XP_005245077 15 9605 XP_005245076 15 9605 XP_006711301 15 9605 XP_005245075 15 9605 XP_005245074 15 9605 XP_005245073 15 9605 XP_005245072 15 9605 NP_849150 15 9605>NP_005091 Length = 1782 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAEV SEKL Sbjct: 342 KAEVASEKL 350>NP_653080 Length = 1684 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAEV SEKL Sbjct: 244 KAEVASEKL 252>XP_005267292 Length = 1677 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAEV SEKL Sbjct: 237 KAEVASEKL 245>XP_005267291 Length = 1684 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAEV SEKL Sbjct: 244 KAEVASEKL 252>XP_005267290 Length = 1782 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAEV SEKL Sbjct: 342 KAEVASEKL 350>NP_002728 Length = 672 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAEVVSEKL 9 KAEV EKL Sbjct: 165 KAEVADEKL 173>NP_612412 Length = 226 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KA+V+ EKL Sbjct: 175 KADVIKEKL 183>XP_006722035 Length = 324 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 KAEVVSEKL 9 KAEV EKL Sbjct: 165 KAEVADEKL 173>XP_005250751 Length = 147 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KA+V+ EKL Sbjct: 96 KADVIKEKL 104>XP_006721807 Length = 742 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AEVVSEKL 9 AE++SEK+ Sbjct: 732 AEIISEKV 739>NP_001035758 Length = 333 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KAEVVSEKL 9 +AEV+++KL Sbjct: 219 EAEVINQKL 227>NP_065393 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KAEVVSEK 8 KA++V+EK Sbjct: 501 KAQIVTEK 508>NP_997404 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KAEVVSEK 8 KA++V+EK Sbjct: 295 KAQIVTEK 302>NP_619580 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 KAEVVSEKL 9 +AEV+++KL Sbjct: 220 EAEVINQKL 228>XP_005264491 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 KAEVVSEK 8 KA++V+EK Sbjct: 295 KAQIVTEK 302>NP_001193928 Length = 2069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE +S+KL Sbjct: 1155 KAESLSDKL 1163>NP_055987 Length = 2817 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1038 KAEKVTEKV 1046>NP_005425 Length = 153 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AEVVSEKL 9 A +VSEKL Sbjct: 113 ATIVSEKL 120>NP_009105 Length = 2027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE +S+KL Sbjct: 1113 KAESLSDKL 1121>XP_005253886 Length = 1545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE +S+KL Sbjct: 647 KAESLSDKL 655>XP_006719269 Length = 2054 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE +S+KL Sbjct: 1155 KAESLSDKL 1163>XP_005245087 Length = 2708 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_005245086 Length = 2714 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_005245085 Length = 2718 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_005245084 Length = 2719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_006711302 Length = 2754 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_005245083 Length = 2774 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_005245082 Length = 2779 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_005245081 Length = 2819 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_005245080 Length = 2824 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_005245079 Length = 2838 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_005245077 Length = 2858 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_005245076 Length = 2869 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_006711301 Length = 2896 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1038 KAEKVTEKV 1046>XP_005245075 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1035 KAEKVTEKV 1043>XP_005245074 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>XP_005245073 Length = 2901 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1038 KAEKVTEKV 1046>XP_005245072 Length = 2903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAEVVSEKL 9 KAE V+EK+ Sbjct: 1040 KAEKVTEKV 1048>NP_849150 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KAEVVSE 7 KA+VVSE Sbjct: 1093 KAQVVSE 1099Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.114 0.245 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 376,954 Number of extensions: 632 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |