Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001866 18 1935 NP_001116105 18 1935 NP_001116106 18 1935 NP_002411 17 2528 NP_001238953 17 2528 NP_001238949 17 2528 NP_055873 17 3301 NP_001121700 17 3301 NP_149985 17 3301 XP_006719854 17 3301 XP_006719853 17 3301 NP_001229602 17 4312 NP_001138462 17 4312 NP_006612 17 4312 NP_001229604 17 4312 NP_001229603 17 4312 NP_001229605 17 4312 NP_001136069 17 4312 XP_006718488 17 4312 NP_006822 17 4312 NP_958784 16 5631 XP_005251036 16 5631 NP_057427 16 7355 NP_071913 16 7355 NP_001850 16 7355 NP_055463 16 7355 NP_060101 16 7355 XP_005247976 16 7355 XP_005247975 16 7355 XP_005247974 16 7355 XP_005247973 16 7355 XP_005247972 16 7355 XP_005247971 16 7355 XP_005263798 16 7355 NP_001138389 15 9605 NP_001138386 15 9605 NP_000132 15 9605 NP_075259 15 9605 NP_001138385 15 9605 NP_001243000 15 9605 NP_037477 15 9605 NP_036367 15 9605 NP_001265623 15 9605 NP_001265625 15 9605 NP_001265624 15 9605 XP_005257603 15 9605 XP_006722058 15 9605 XP_005257602 15 9605 XP_006717776 15 9605 XP_006717773 15 9605 XP_006717772 15 9605 XP_006717771 15 9605 XP_005250000 15 9605 XP_005265024 15 9605 XP_006713097 15 9605>NP_001866 Length = 1500 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 KA +FSW R Sbjct: 1309 KAPMFSWPR 1317>NP_001116105 Length = 1506 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 KA +FSW R Sbjct: 1315 KAPMFSWPR 1323>NP_001116106 Length = 1049 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 KA +FSW R Sbjct: 858 KAPMFSWPR 866>NP_002411 Length = 1603 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 K AVF W+R Sbjct: 626 KMAVFLWQR 634>NP_001238953 Length = 1625 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 K AVF W+R Sbjct: 648 KMAVFLWQR 656>NP_001238949 Length = 1642 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 K AVF W+R Sbjct: 665 KMAVFLWQR 673>NP_055873 Length = 1905 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSWKR 9 V+SWKR Sbjct: 1382 VYSWKR 1387>NP_001121700 Length = 711 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KAAVFSWKR 9 +AAV +WKR Sbjct: 12 RAAVPAWKR 20>NP_149985 Length = 549 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAAVFSWKR 9 K+A+F+W + Sbjct: 377 KSAIFNWAK 385>XP_006719854 Length = 1550 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSWKR 9 V+SWKR Sbjct: 1027 VYSWKR 1032>XP_006719853 Length = 1809 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSWKR 9 V+SWKR Sbjct: 1286 VYSWKR 1291>NP_001229602 Length = 483 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AVFSWK 8 AVF+WK Sbjct: 149 AVFAWK 154>NP_001138462 Length = 1742 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AAVFSWKR 9 +AVF W+R Sbjct: 1254 SAVFFWRR 1261>NP_006612 Length = 530 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AVFSWK 8 AVF+WK Sbjct: 196 AVFAWK 201>NP_001229604 Length = 483 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AVFSWK 8 AVF+WK Sbjct: 149 AVFAWK 154>NP_001229603 Length = 483 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AVFSWK 8 AVF+WK Sbjct: 149 AVFAWK 154>NP_001229605 Length = 483 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AVFSWK 8 AVF+WK Sbjct: 149 AVFAWK 154>NP_001136069 Length = 361 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAAVFSW 7 K AVF+W Sbjct: 62 KVAVFTW 68>XP_006718488 Length = 425 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAAVFSW 7 K AVF+W Sbjct: 62 KVAVFTW 68>NP_006822 Length = 425 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 KAAVFSW 7 K AVF+W Sbjct: 62 KVAVFTW 68>NP_958784 Length = 4547 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AAVFSWKR 9 AAV+ W+R Sbjct: 21 AAVWHWRR 28>XP_005251036 Length = 4552 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AAVFSWKR 9 AAV+ W+R Sbjct: 21 AAVWHWRR 28>NP_057427 Length = 3114 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AAVFSWKR 9 ++VFSW++ Sbjct: 214 SSVFSWQQ 221>NP_071913 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 AVFSW 7 AVFSW Sbjct: 418 AVFSW 422>NP_001850 Length = 190 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VFSWKR 9 +FSWK+ Sbjct: 174 LFSWKK 179>NP_055463 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KAAVFSW 7 KAAV SW Sbjct: 906 KAAVDSW 912>NP_060101 Length = 1712 Score = 15.8 bits (29), Expect = 7355 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 4 VFSWK 8 +FSWK Sbjct: 198 IFSWK 202>XP_005247976 Length = 1002 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KAAVFSW 7 KAAV SW Sbjct: 700 KAAVDSW 706>XP_005247975 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KAAVFSW 7 KAAV SW Sbjct: 906 KAAVDSW 912>XP_005247974 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KAAVFSW 7 KAAV SW Sbjct: 906 KAAVDSW 912>XP_005247973 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KAAVFSW 7 KAAV SW Sbjct: 906 KAAVDSW 912>XP_005247972 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KAAVFSW 7 KAAV SW Sbjct: 906 KAAVDSW 912>XP_005247971 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 KAAVFSW 7 KAAV SW Sbjct: 906 KAAVDSW 912>XP_005263798 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AAVFSWK 8 +++FSWK Sbjct: 230 SSLFSWK 236>NP_001138389 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVFSWKR 9 AAV SW + Sbjct: 67 AAVISWTK 74>NP_001138386 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVFSWKR 9 AAV SW + Sbjct: 67 AAVISWTK 74>NP_000132 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVFSWKR 9 AAV SW + Sbjct: 67 AAVISWTK 74>NP_075259 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVFSWKR 9 AAV SW + Sbjct: 67 AAVISWTK 74>NP_001138385 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVFSWKR 9 AAV SW + Sbjct: 67 AAVISWTK 74>NP_001243000 Length = 5207 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 AAVFSWKR 9 AAV W R Sbjct: 5197 AAVLKWNR 5204>NP_037477 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 KAA FS+ R Sbjct: 265 KAAAFSYYR 273>NP_036367 Length = 1279 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 K++VF W + Sbjct: 99 KSSVFPWHK 107>NP_001265623 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 KAA FS+ R Sbjct: 265 KAAAFSYYR 273>NP_001265625 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 KAA FS+ R Sbjct: 77 KAAAFSYYR 85>NP_001265624 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 KAA FS+ R Sbjct: 256 KAAAFSYYR 264>XP_005257603 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 AAVFSWKR 9 AAV W R Sbjct: 5246 AAVLKWNR 5253>XP_006722058 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 AAVFSWKR 9 AAV W R Sbjct: 5246 AAVLKWNR 5253>XP_005257602 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 AAVFSWKR 9 AAV W R Sbjct: 5246 AAVLKWNR 5253>XP_006717776 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVFSWKR 9 AAV SW + Sbjct: 86 AAVISWTK 93>XP_006717773 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVFSWKR 9 AAV SW + Sbjct: 86 AAVISWTK 93>XP_006717772 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVFSWKR 9 AAV SW + Sbjct: 86 AAVISWTK 93>XP_006717771 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVFSWKR 9 AAV SW + Sbjct: 86 AAVISWTK 93>XP_005250000 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 3 AVFSW 7 A+FSW Sbjct: 15 AIFSW 19>XP_005265024 Length = 1278 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 K++VF W + Sbjct: 99 KSSVFPWHK 107>XP_006713097 Length = 1279 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 KAAVFSWKR 9 K++VF W + Sbjct: 99 KSSVFPWHK 107Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.123 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 664,282 Number of extensions: 758 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |