Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 19 869 NP_116247 18 1935 NP_001273306 18 1935 NP_001273307 18 1935 XP_006711646 18 1935 XP_006711645 18 1935 NP_002290 17 4312 NP_001120936 17 4312 NP_001073882 16 7355 NP_001229854 16 7355 NP_055673 16 7355 NP_056002 16 7355 XP_005273479 16 7355 XP_006714020 16 7355 XP_005248200 16 7355 XP_006714019 16 7355 XP_005245747 16 7355 XP_005245746 16 7355 XP_005245743 16 7355 XP_005245742 16 7355 XP_006711757 16 7355 XP_005245741 16 7355 NP_001165349 15 9605 NP_001165350 15 9605 NP_001186728 15 9605 NP_005360 15 9605 NP_001165347 15 9605 NP_060733 15 9605 NP_001186729 15 9605 NP_787120 15 9605 XP_003960321 15 9605 XP_006724820 15 9605 XP_005262471 15 9605 XP_005262470 15 9605 XP_006713670 15 9605 XP_005247446 15 9605 XP_006713669 15 9605 XP_006712102 15 9605 XP_001718307 15 9605 XP_001715523 15 9605 NP_001165348 15 9605 NP_001093325 15 9605>NP_005179 Length = 906 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 KAAS SLHK Sbjct: 521 KAASGSLHK 529>NP_116247 Length = 434 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 +AASDS HK Sbjct: 172 QAASDSSHK 180>NP_001273306 Length = 403 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 +AASDS HK Sbjct: 141 QAASDSSHK 149>NP_001273307 Length = 378 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 +AASDS HK Sbjct: 116 QAASDSSHK 124>XP_006711646 Length = 419 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 +AASDS HK Sbjct: 157 QAASDSSHK 165>XP_006711645 Length = 420 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 +AASDS HK Sbjct: 158 QAASDSSHK 166>NP_002290 Length = 1927 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 + ASDS HK Sbjct: 427 EVASDSYHK 435>NP_001120936 Length = 3925 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SDSLHK 9 SDSLHK Sbjct: 369 SDSLHK 374>NP_001073882 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AASDSLHK 9 A SDS HK Sbjct: 473 AGSDSSHK 480>NP_001229854 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAA D LH+ Sbjct: 208 KAAIDHLHQ 216>NP_055673 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAA D LH+ Sbjct: 286 KAAIDHLHQ 294>NP_056002 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAAS LH+ Sbjct: 756 KAASKGLHQ 764>XP_005273479 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SDSLHK 9 SDS+HK Sbjct: 133 SDSIHK 138>XP_006714020 Length = 1097 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAAS LH+ Sbjct: 721 KAASKGLHQ 729>XP_005248200 Length = 1103 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAAS LH+ Sbjct: 756 KAASKGLHQ 764>XP_006714019 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAAS LH+ Sbjct: 756 KAASKGLHQ 764>XP_005245747 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAA D LH+ Sbjct: 46 KAAIDHLHQ 54>XP_005245746 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAA D LH+ Sbjct: 51 KAAIDHLHQ 59>XP_005245743 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAA D LH+ Sbjct: 286 KAAIDHLHQ 294>XP_005245742 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAA D LH+ Sbjct: 208 KAAIDHLHQ 216>XP_006711757 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAA D LH+ Sbjct: 208 KAAIDHLHQ 216>XP_005245741 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 KAA D LH+ Sbjct: 208 KAAIDHLHQ 216>NP_001165349 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 K+ +DS+H+ Sbjct: 670 KSVNDSMHQ 678>NP_001165350 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 K+ +DS+H+ Sbjct: 686 KSVNDSMHQ 694>NP_001186728 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 + SDSLH+ Sbjct: 343 RRTSDSLHQ 351>NP_005360 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 K+ +DS+H+ Sbjct: 670 KSVNDSMHQ 678>NP_001165347 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 K+ +DS+H+ Sbjct: 746 KSVNDSMHQ 754>NP_060733 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KAASDSL 7 KAASDS+ Sbjct: 200 KAASDSV 206>NP_001186729 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 + SDSLH+ Sbjct: 254 RRTSDSLHQ 262>NP_787120 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 + SDSLH+ Sbjct: 299 RRTSDSLHQ 307>XP_003960321 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 +AAS S HK Sbjct: 316 RAASHSSHK 324>XP_006724820 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 K+ +DS+H+ Sbjct: 647 KSVNDSMHQ 655>XP_005262471 Length = 1005 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 K+ +DS+H+ Sbjct: 815 KSVNDSMHQ 823>XP_005262470 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 K+ +DS+H+ Sbjct: 789 KSVNDSMHQ 797>XP_006713670 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 + SDSLH+ Sbjct: 164 RRTSDSLHQ 172>XP_005247446 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 + SDSLH+ Sbjct: 311 RRTSDSLHQ 319>XP_006713669 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 + SDSLH+ Sbjct: 341 RRTSDSLHQ 349>XP_006712102 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KAASDSL 7 KAASDS+ Sbjct: 78 KAASDSV 84>XP_001718307 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 +AAS S HK Sbjct: 316 RAASHSSHK 324>XP_001715523 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAASDSLHK 9 +AAS S HK Sbjct: 316 RAASHSSHK 324>NP_001165348 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 K+ +DS+H+ Sbjct: 631 KSVNDSMHQ 639>NP_001093325 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KAASDSLHK 9 K+ +DS+H+ Sbjct: 730 KSVNDSMHQ 738Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.107 0.268 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 527,623 Number of extensions: 829 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |