Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1135 XP_005271621 18 1135 XP_006718907 18 1135 XP_006718906 18 1135 XP_005271619 18 1135 XP_005271618 18 1135 NP_005302 17 2528 NP_001001549 17 2528 NP_001001550 17 2528 NP_001001555 17 2528 XP_005271824 17 2528 XP_006715768 17 2528 XP_005271823 17 2528 XP_005271822 17 2528 XP_006715767 17 2528 XP_006715766 17 2528 XP_005271818 17 2528 XP_005271817 17 2528 NP_057712 17 4312 NP_567823 17 4312 NP_004103 17 4312 XP_005252516 17 4312 XP_005252514 17 4312 XP_005252511 17 4312 NP_001253974 16 5631 NP_005780 16 5631 NP_789839 16 5631 NP_000104 16 7355 NP_001231800 16 7355 NP_001334 16 7355 NP_001026885 16 7355 NP_116238 16 7355 NP_001121363 15 9605 NP_004521 15 9605 NP_078973 15 9605 NP_001008537 15 9605 XP_006724709 15 9605 XP_006724708 15 9605 XP_006717679 15 9605 XP_005269551 15 9605 XP_006714215 15 9605 XP_006714214 15 9605 XP_005262915 15 9605 XP_005265544 15 9605 XP_005265543 15 9605 XP_005265542 15 9605 NP_055806 15 9605 NP_653188 15 9605>NP_000042 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 KAAMNFF 7 KAAMNFF Sbjct: 621 KAAMNFF 627>XP_005271621 Length = 2708 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 KAAMNFF 7 KAAMNFF Sbjct: 273 KAAMNFF 279>XP_006718907 Length = 3050 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 KAAMNFF 7 KAAMNFF Sbjct: 621 KAAMNFF 627>XP_006718906 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 KAAMNFF 7 KAAMNFF Sbjct: 621 KAAMNFF 627>XP_005271619 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 KAAMNFF 7 KAAMNFF Sbjct: 621 KAAMNFF 627>XP_005271618 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 KAAMNFF 7 KAAMNFF Sbjct: 621 KAAMNFF 627>NP_005302 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 256 KNPMNFFPE 264>NP_001001549 Length = 548 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 256 KNPMNFFPE 264>NP_001001550 Length = 536 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 198 KNPMNFFPE 206>NP_001001555 Length = 536 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 198 KNPMNFFPE 206>XP_005271824 Length = 407 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 69 KNPMNFFPE 77>XP_006715768 Length = 536 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 198 KNPMNFFPE 206>XP_005271823 Length = 536 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 198 KNPMNFFPE 206>XP_005271822 Length = 536 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 198 KNPMNFFPE 206>XP_006715767 Length = 588 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 250 KNPMNFFPE 258>XP_006715766 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 256 KNPMNFFPE 264>XP_005271818 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 256 KNPMNFFPE 264>XP_005271817 Length = 594 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K MNFFP+ Sbjct: 256 KNPMNFFPE 264>NP_057712 Length = 647 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K A+N FPK Sbjct: 175 KMAVNSFPK 183>NP_567823 Length = 544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K A+N FPK Sbjct: 175 KMAVNSFPK 183>NP_004103 Length = 225 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 KAA +F PK Sbjct: 191 KAAAHFLPK 199>XP_005252516 Length = 550 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K A+N FPK Sbjct: 181 KMAVNSFPK 189>XP_005252514 Length = 602 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K A+N FPK Sbjct: 130 KMAVNSFPK 138>XP_005252511 Length = 653 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KAAMNFFPK 9 K A+N FPK Sbjct: 181 KMAVNSFPK 189>NP_001253974 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NFFPK 9 NFFPK Sbjct: 43 NFFPK 47>NP_005780 Length = 254 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NFFPK 9 NFFPK Sbjct: 32 NFFPK 36>NP_789839 Length = 267 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NFFPK 9 NFFPK Sbjct: 32 NFFPK 36>NP_000104 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 MNFFPK 9 M FFPK Sbjct: 304 MTFFPK 309>NP_001231800 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AAMNFFP 8 A +NFFP Sbjct: 261 ANLNFFP 267>NP_001334 Length = 770 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AAMNFFP 8 A +NFFP Sbjct: 282 ANLNFFP 288>NP_001026885 Length = 1027 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AMNFFPK 9 A+N FPK Sbjct: 539 AVNIFPK 545>NP_116238 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 KAAMNFFP 8 +A NFFP Sbjct: 172 EAVKNFFP 179>NP_001121363 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAMNFFPK 9 A NFFP+ Sbjct: 58 ANYNFFPR 65>NP_004521 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAMNFFPK 9 A NFFP+ Sbjct: 108 ANYNFFPR 115>NP_078973 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AAMNFFP 8 AA+N FP Sbjct: 45 AAVNLFP 51>NP_001008537 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 AAMNFFP 8 A NFFP Sbjct: 333 AQFNFFP 339>XP_006724709 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 AAMNFFP 8 A NFFP Sbjct: 333 AQFNFFP 339>XP_006724708 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 AAMNFFP 8 A NFFP Sbjct: 333 AQFNFFP 339>XP_006717679 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MNFFPK 9 +NFFP+ Sbjct: 176 LNFFPE 181>XP_005269551 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MNFFPK 9 +NFFP+ Sbjct: 277 LNFFPE 282>XP_006714215 Length = 3544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AAMNFFP 8 +AMN FP Sbjct: 750 SAMNVFP 756>XP_006714214 Length = 3544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AAMNFFP 8 +AMN FP Sbjct: 750 SAMNVFP 756>XP_005262915 Length = 3544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AAMNFFP 8 +AMN FP Sbjct: 750 SAMNVFP 756>XP_005265544 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AAMNFFP 8 AA+N FP Sbjct: 45 AAVNLFP 51>XP_005265543 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AAMNFFP 8 AA+N FP Sbjct: 146 AAVNLFP 152>XP_005265542 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AAMNFFP 8 AA+N FP Sbjct: 146 AAVNLFP 152>NP_055806 Length = 3526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AAMNFFP 8 +AMN FP Sbjct: 732 SAMNVFP 738>NP_653188 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 MNFFPK 9 +NFFP+ Sbjct: 344 LNFFPE 349Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.135 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 455,748 Number of extensions: 477 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |