Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 20 299 NP_858045 20 299 NP_006525 20 299 NP_001167559 20 299 NP_001091996 16 5631 NP_694938 16 5631 NP_001273500 16 5631 NP_001273499 16 5631 XP_005271464 16 5631 XP_005271463 16 5631 NP_055738 16 7355 NP_001265367 16 7355 NP_001073141 16 7355 NP_776183 16 7355 NP_597999 16 7355 XP_006719840 16 7355 XP_006712507 16 7355 XP_006712506 16 7355 XP_006712505 16 7355 XP_006712504 16 7355 XP_005246531 16 7355 NP_001143 15 9605 NP_005165 15 9605 NP_001001973 15 9605 NP_000252 15 9605 XP_005254442 15 9605>NP_001167558 Length = 1423 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IYQSSEVKG 9 IYQSSE+KG Sbjct: 1355 IYQSSEMKG 1363>NP_858045 Length = 1424 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IYQSSEVKG 9 IYQSSE+KG Sbjct: 1356 IYQSSEMKG 1364>NP_006525 Length = 1420 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IYQSSEVKG 9 IYQSSE+KG Sbjct: 1352 IYQSSEMKG 1360>NP_001167559 Length = 1415 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IYQSSEVKG 9 IYQSSE+KG Sbjct: 1347 IYQSSEMKG 1355>NP_001091996 Length = 394 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 ++QS+EVK Sbjct: 156 VFQSTEVK 163>NP_694938 Length = 384 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 ++QS+EVK Sbjct: 146 VFQSTEVK 153>NP_001273500 Length = 355 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 ++QS+EVK Sbjct: 117 VFQSTEVK 124>NP_001273499 Length = 355 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 ++QS+EVK Sbjct: 117 VFQSTEVK 124>XP_005271464 Length = 384 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 ++QS+EVK Sbjct: 146 VFQSTEVK 153>XP_005271463 Length = 394 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 ++QS+EVK Sbjct: 156 VFQSTEVK 163>NP_055738 Length = 1142 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYQSSEVK 8 +YQ SEV+ Sbjct: 656 VYQGSEVE 663>NP_001265367 Length = 1198 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYQSSEVK 8 +YQ SEV+ Sbjct: 712 VYQGSEVE 719>NP_001073141 Length = 1198 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYQSSEVK 8 +YQ SEV+ Sbjct: 712 VYQGSEVE 719>NP_776183 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 +Y+SSEV+ Sbjct: 63 LYRSSEVR 70>NP_597999 Length = 264 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YQSSEV 7 YQSSEV Sbjct: 7 YQSSEV 12>XP_006719840 Length = 1080 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYQSSEVK 8 +YQ SEV+ Sbjct: 594 VYQGSEVE 601>XP_006712507 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 +Y+SSEV+ Sbjct: 63 LYRSSEVR 70>XP_006712506 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 +Y+SSEV+ Sbjct: 63 LYRSSEVR 70>XP_006712505 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 +Y+SSEV+ Sbjct: 63 LYRSSEVR 70>XP_006712504 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 +Y+SSEV+ Sbjct: 63 LYRSSEVR 70>XP_005246531 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYQSSEVK 8 +Y+SSEV+ Sbjct: 63 LYRSSEVR 70>NP_001143 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IYQSSEVKG 9 IY+S +KG Sbjct: 164 IYKSDGIKG 172>NP_005165 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 IYQSSEVKG 9 +Y+ +++KG Sbjct: 76 LYEKADIKG 84>NP_001001973 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 IYQSSEVKG 9 +Y+ +++KG Sbjct: 76 LYEKADIKG 84>NP_000252 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IYQSSEVKG 9 IY + E KG Sbjct: 391 IYSTDEAKG 399>XP_005254442 Length = 3041 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSEVKG 9 SSEVKG Sbjct: 109 SSEVKG 114Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.122 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 400,597 Number of extensions: 469 Number of successful extensions: 26 Number of sequences better than 10000.0: 26 Number of HSP's gapped: 26 Number of HSP's successfully gapped: 26 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |