Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001005182 17 2528 NP_001010986 17 3301 NP_775965 17 3301 NP_663696 17 3301 XP_006724816 17 3301 XP_006724815 17 3301 XP_006724814 17 3301 XP_005262462 17 3301 NP_003030 17 4312 NP_001005497 17 4312 XP_006710899 17 4312 XP_005263548 17 4312 NP_001005326 17 4312 NP_001245134 16 5631 NP_001005489 16 5631 NP_659505 16 5631 NP_005250 16 7355 NP_006209 16 7355 NP_005004 16 7355 NP_009046 16 7355 NP_055056 16 7355 XP_006718302 16 7355 XP_005253005 16 7355 XP_005253000 16 7355 XP_005253004 16 7355 XP_005253002 16 7355 XP_005253001 16 7355 XP_005252999 16 7355 XP_005252998 16 7355 XP_005252698 16 7355 XP_006713721 16 7355 NP_001005185 16 7355 NP_703146 16 7355 NP_703145 16 7355 NP_001006942 15 9605 NP_005778 15 9605 XP_006723058 15 9605 NP_001073903 15 9605>NP_001005182 Length = 312 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IYIFLLIT 8 I++FLLIT Sbjct: 25 IFVFLLIT 32>NP_001010986 Length = 1119 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IYIFLLITQ 9 +Y+F+L+T+ Sbjct: 297 VYLFILLTK 305>NP_775965 Length = 1132 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IYIFLLITQ 9 +Y+F+L+T+ Sbjct: 297 VYLFILLTK 305>NP_663696 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YIFLLITQ 9 Y++LL+TQ Sbjct: 543 YLYLLLTQ 550>XP_006724816 Length = 1105 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IYIFLLITQ 9 +Y+F+L+T+ Sbjct: 294 VYLFILLTK 302>XP_006724815 Length = 1105 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IYIFLLITQ 9 +Y+F+L+T+ Sbjct: 294 VYLFILLTK 302>XP_006724814 Length = 1116 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IYIFLLITQ 9 +Y+F+L+T+ Sbjct: 294 VYLFILLTK 302>XP_005262462 Length = 1129 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IYIFLLITQ 9 +Y+F+L+T+ Sbjct: 294 VYLFILLTK 302>NP_003030 Length = 501 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IYIFLLITQ 9 IYIFL++ + Sbjct: 454 IYIFLIVPE 462>NP_001005497 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYIFLLIT 8 ++IFLL+T Sbjct: 25 LFIFLLVT 32>XP_006710899 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IYIFLLITQ 9 IYIFL++ + Sbjct: 444 IYIFLIVPE 452>XP_005263548 Length = 501 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IYIFLLITQ 9 IYIFL++ + Sbjct: 454 IYIFLIVPE 462>NP_001005326 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIFLLIT 8 YIF+L+T Sbjct: 218 YIFILVT 224>NP_001245134 Length = 791 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYIFLLIT 8 +++FLLIT Sbjct: 653 LFLFLLIT 660>NP_001005489 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIFLLIT 8 Y+F+LIT Sbjct: 216 YLFILIT 222>NP_659505 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IYIFLLIT 8 +++FLLIT Sbjct: 653 LFLFLLIT 660>NP_005250 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IYIFLLI 7 IY+F+LI Sbjct: 10 IYLFMLI 16>NP_006209 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YIFLLITQ 9 YIF+ +TQ Sbjct: 68 YIFVSVTQ 75>NP_005004 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YIFLLIT 8 Y FLLIT Sbjct: 10 YCFLLIT 16>NP_009046 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IYIFLLI 7 IY+FLL+ Sbjct: 5 IYLFLLL 11>NP_055056 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YIFLLIT 8 Y FLLIT Sbjct: 249 YYFLLIT 255>XP_006718302 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YIFLLIT 8 Y FLLIT Sbjct: 10 YCFLLIT 16>XP_005253005 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YIFLLIT 8 Y FLLIT Sbjct: 10 YCFLLIT 16>XP_005253000 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YIFLLIT 8 Y FLLIT Sbjct: 10 YCFLLIT 16>XP_005253004 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YIFLLIT 8 Y FLLIT Sbjct: 10 YCFLLIT 16>XP_005253002 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YIFLLIT 8 Y FLLIT Sbjct: 10 YCFLLIT 16>XP_005253001 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YIFLLIT 8 Y FLLIT Sbjct: 10 YCFLLIT 16>XP_005252999 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YIFLLIT 8 Y FLLIT Sbjct: 10 YCFLLIT 16>XP_005252998 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YIFLLIT 8 Y FLLIT Sbjct: 10 YCFLLIT 16>XP_005252698 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YIFLLIT 8 Y FLLIT Sbjct: 213 YYFLLIT 219>XP_006713721 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YIFLLITQ 9 YIF+ +TQ Sbjct: 68 YIFVSVTQ 75>NP_001005185 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IYIFLLI 7 IY+FLL+ Sbjct: 25 IYLFLLL 31>NP_703146 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIFLLIT 8 YI++LIT Sbjct: 218 YIYILIT 224>NP_703145 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIFLLIT 8 YI++LIT Sbjct: 214 YIYILIT 220>NP_001006942 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFLLITQ 9 +FLL+TQ Sbjct: 171 LFLLLTQ 177>NP_005778 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFLLITQ 9 +FLL+TQ Sbjct: 219 LFLLLTQ 225>XP_006723058 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIFLLIT 8 +IFLL+T Sbjct: 52 FIFLLLT 58>NP_001073903 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YIFLLIT 8 +IFLL+T Sbjct: 81 FIFLLLT 87Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.354 0.170 0.474 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 378,742 Number of extensions: 891 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |