Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003290 20 509 NP_443199 18 1935 NP_940905 17 3301 XP_005248167 17 3301 XP_006711360 17 3301 XP_006711359 17 3301 XP_006711357 17 3301 NP_001121636 17 4312 NP_000323 17 4312 NP_065873 16 5631 NP_001258932 16 5631 XP_006717257 16 5631 XP_006717256 16 5631 NP_003633 16 7355 XP_006712871 16 7355 NP_001028252 16 7355 NP_055441 16 7355 NP_001073932 15 9605 NP_001368 15 9605 NP_002045 15 9605 NP_787079 15 9605 NP_061918 15 9605 NP_001171894 15 9605 NP_001137296 15 9605 NP_659452 15 9605 NP_001107604 15 9605 NP_001091985 15 9605 NP_060488 15 9605 XP_005269054 15 9605 XP_006718966 15 9605 XP_005246845 15 9605 XP_006712765 15 9605 XP_006712764 15 9605 XP_005246844 15 9605 XP_006712763 15 9605 XP_006712762 15 9605 XP_006712761 15 9605 XP_005245596 15 9605 NP_055545 15 9605>NP_003290 Length = 803 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IYFMAGSIR 9 IYFMAGS R Sbjct: 538 IYFMAGSSR 546>NP_443199 Length = 378 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IYFMAGSIR 9 IYF GS+R Sbjct: 313 IYFFVGSLR 321>NP_940905 Length = 1135 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 +Y+M GSI Sbjct: 774 VYYMVGSI 781>XP_005248167 Length = 592 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YFMAGSIR 9 YF+ GSIR Sbjct: 371 YFVKGSIR 378>XP_006711360 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 +Y+M GSI Sbjct: 331 VYYMVGSI 338>XP_006711359 Length = 752 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 +Y+M GSI Sbjct: 384 VYYMVGSI 391>XP_006711357 Length = 1142 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 +Y+M GSI Sbjct: 774 VYYMVGSI 781>NP_001121636 Length = 815 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YFMAGSI 8 YFM GSI Sbjct: 573 YFMKGSI 579>NP_000323 Length = 815 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YFMAGSI 8 YFM GSI Sbjct: 573 YFMKGSI 579>NP_065873 Length = 1235 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 +Y+M GS+ Sbjct: 856 VYYMEGSV 863>NP_001258932 Length = 1211 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 +Y+M GS+ Sbjct: 811 VYYMEGSV 818>XP_006717257 Length = 1083 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 +Y+M GS+ Sbjct: 683 VYYMEGSV 690>XP_006717256 Length = 1172 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 +Y+M GS+ Sbjct: 772 VYYMEGSV 779>NP_003633 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IYFMAGSI 8 +Y++AGS+ Sbjct: 76 LYYIAGSL 83>XP_006712871 Length = 413 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 IYFMAGSI 8 +Y++AGS+ Sbjct: 70 LYYIAGSL 77>NP_001028252 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FMAGSI 8 FMAGSI Sbjct: 49 FMAGSI 54>NP_055441 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FMAGSI 8 FMAGSI Sbjct: 4 FMAGSI 9>NP_001073932 Length = 4314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 IY +AGS+ Sbjct: 2466 IYLLAGSM 2473>NP_001368 Length = 4307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 IY +AGS+ Sbjct: 2466 IYLLAGSM 2473>NP_002045 Length = 180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IYFMAG 6 IYF+AG Sbjct: 4 IYFVAG 9>NP_787079 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 IYFMAG 6 IYFM G Sbjct: 199 IYFMTG 204>NP_061918 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 YFMAGSI 8 YF++GS+ Sbjct: 662 YFLSGSL 668>NP_001171894 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 YFMAGSI 8 YF++GS+ Sbjct: 662 YFLSGSL 668>NP_001137296 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 I+FM GS+ Sbjct: 523 IFFMIGSM 530>NP_659452 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IYFMAG 6 +YF+AG Sbjct: 290 VYFLAG 295>NP_001107604 Length = 2694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IYFMAGSI 8 IYF GSI Sbjct: 1914 IYFYDGSI 1921>NP_001091985 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 IYFMAG 6 +YF+AG Sbjct: 290 VYFLAG 295>NP_060488 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 I+FM GS+ Sbjct: 523 IFFMIGSM 530>XP_005269054 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 I+FM GS+ Sbjct: 523 IFFMIGSM 530>XP_006718966 Length = 4300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 IY +AGS+ Sbjct: 2466 IYLLAGSM 2473>XP_005246845 Length = 1624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IYFMAGSI 8 IYF GSI Sbjct: 831 IYFYDGSI 838>XP_006712765 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IYFMAGSI 8 IYF GSI Sbjct: 1886 IYFYDGSI 1893>XP_006712764 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IYFMAGSI 8 IYF GSI Sbjct: 1943 IYFYDGSI 1950>XP_005246844 Length = 2707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IYFMAGSI 8 IYF GSI Sbjct: 1914 IYFYDGSI 1921>XP_006712763 Length = 2716 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IYFMAGSI 8 IYF GSI Sbjct: 1943 IYFYDGSI 1950>XP_006712762 Length = 2723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IYFMAGSI 8 IYF GSI Sbjct: 1943 IYFYDGSI 1950>XP_006712761 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IYFMAGSI 8 IYF GSI Sbjct: 1943 IYFYDGSI 1950>XP_005245596 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YFMAGSIR 9 YF+A S+R Sbjct: 330 YFLAWSLR 337>NP_055545 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IYFMAGSI 8 +Y MAG++ Sbjct: 208 LYIMAGTV 215Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.153 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,299 Number of extensions: 529 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |