Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 18 1935 XP_005266703 18 1935 NP_803879 16 7355 NP_803881 16 7355 NP_001258992 16 7355 NP_110428 16 7355 NP_001229291 16 7355 NP_001258991 16 7355 NP_001092270 16 7355 NP_001258990 16 7355 XP_006724671 16 7355 XP_006724670 16 7355 NP_597732 15 9605 XP_006722741 15 9605 XP_006722740 15 9605 XP_006722739 15 9605 XP_006722738 15 9605 XP_006722737 15 9605 XP_005259567 15 9605 XP_005267570 15 9605 XP_006720171 15 9605 XP_005267569 15 9605 XP_005267568 15 9605 XP_006720170 15 9605 XP_006720169 15 9605>NP_443179 Length = 2170 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IYAAEAQLL 9 IYAAEAQ L Sbjct: 1994 IYAAEAQPL 2002>XP_005266703 Length = 1501 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IYAAEAQLL 9 IYAAEAQ L Sbjct: 1325 IYAAEAQPL 1333>NP_803879 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YAAEAQ 7 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_803881 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YAAEAQ 7 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_001258992 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YAAEAQ 7 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_110428 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YAAEAQ 7 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_001229291 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YAAEAQ 7 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_001258991 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YAAEAQ 7 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_001092270 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YAAEAQ 7 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_001258990 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YAAEAQ 7 YAAEAQ Sbjct: 152 YAAEAQ 157>XP_006724671 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YAAEAQ 7 YAAEAQ Sbjct: 152 YAAEAQ 157>XP_006724670 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YAAEAQ 7 YAAEAQ Sbjct: 152 YAAEAQ 157>NP_597732 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YAAEAQL 8 +AAEAQL Sbjct: 1014 HAAEAQL 1020>XP_006722741 Length = 1117 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YAAEAQL 8 +AAEAQL Sbjct: 985 HAAEAQL 991>XP_006722740 Length = 1153 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YAAEAQL 8 +AAEAQL Sbjct: 1021 HAAEAQL 1027>XP_006722739 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YAAEAQL 8 +AAEAQL Sbjct: 1049 HAAEAQL 1055>XP_006722738 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YAAEAQL 8 +AAEAQL Sbjct: 1049 HAAEAQL 1055>XP_006722737 Length = 1182 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YAAEAQL 8 +AAEAQL Sbjct: 1050 HAAEAQL 1056>XP_005259567 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YAAEAQL 8 +AAEAQL Sbjct: 1085 HAAEAQL 1091>XP_005267570 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IYAAEAQLL 9 IYA +QLL Sbjct: 145 IYALNSQLL 153>XP_006720171 Length = 1240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IYAAEAQLL 9 IYA +QLL Sbjct: 166 IYALNSQLL 174>XP_005267569 Length = 1340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IYAAEAQLL 9 IYA +QLL Sbjct: 145 IYALNSQLL 153>XP_005267568 Length = 1340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IYAAEAQLL 9 IYA +QLL Sbjct: 145 IYALNSQLL 153>XP_006720170 Length = 1354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IYAAEAQLL 9 IYA +QLL Sbjct: 159 IYALNSQLL 167>XP_006720169 Length = 1361 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IYAAEAQLL 9 IYA +QLL Sbjct: 166 IYALNSQLL 174Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.132 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 279,031 Number of extensions: 230 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |