Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001265522 17 2528 NP_065847 17 4312 XP_005272099 17 4312 XP_005272098 17 4312 XP_006714726 17 4312 NP_001130000 16 5631 NP_006207 16 5631 NP_001130002 16 5631 NP_001158307 16 5631 NP_061952 16 5631 NP_003875 16 5631 NP_001268861 16 5631 NP_060230 16 5631 NP_001268862 16 5631 XP_006716097 16 5631 XP_005249604 16 5631 XP_005265585 16 5631 XP_005246699 16 5631 XP_005246698 16 5631 NP_005742 16 7355 NP_671714 16 7355 NP_006277 16 7355 NP_001171612 16 7355 NP_001171609 16 7355 NP_001171611 16 7355 NP_009042 16 7355 NP_001171613 16 7355 NP_001171610 16 7355 NP_001127911 16 7355 NP_001127910 16 7355 NP_665696 16 7355 NP_001074319 16 7355 NP_003117 16 7355 NP_060169 16 7355 NP_001073879 16 7355 XP_005268388 16 7355 XP_006720041 16 7355 XP_006720040 16 7355 XP_005268387 16 7355 XP_005268385 16 7355 XP_005268384 16 7355 XP_005268383 16 7355 XP_006715890 16 7355 XP_005250160 16 7355 XP_005250159 16 7355 XP_005247792 16 7355 XP_006713800 16 7355 XP_005247791 16 7355 XP_005247790 16 7355 XP_005247788 16 7355 XP_006713743 16 7355 XP_006713742 16 7355 XP_006713741 16 7355 XP_005247615 16 7355 XP_006713740 16 7355 XP_006713739 16 7355 XP_006713738 16 7355 XP_005265144 16 7355 XP_006712013 16 7355 NP_001127909 16 7355 NP_055068 15 9605 NP_001156750 15 9605 NP_114432 15 9605 NP_001156751 15 9605 NP_653319 15 9605 NP_001136025 15 9605 NP_060672 15 9605 NP_004876 15 9605 NP_899631 15 9605 NP_899630 15 9605 NP_003707 15 9605 NP_001138228 15 9605 NP_444264 15 9605 NP_001265424 15 9605 XP_005270192 15 9605 XP_005270168 15 9605 XP_006713578 15 9605 XP_005245988 15 9605 NP_061063 15 9605 NP_001092808 15 9605>NP_001265522 Length = 522 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 ++SR+QKEI Sbjct: 98 VLSRQQKEI 106>NP_065847 Length = 1030 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V RK+KE+ Sbjct: 683 VVQRKEKEL 691>XP_005272099 Length = 975 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V RK+KE+ Sbjct: 628 VVQRKEKEL 636>XP_005272098 Length = 1047 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V RK+KE+ Sbjct: 700 VVQRKEKEL 708>XP_006714726 Length = 1052 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V RK+KE+ Sbjct: 705 VVQRKEKEL 713>NP_001130000 Length = 397 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 IVS+K K+I Sbjct: 99 IVSKKNKDI 107>NP_006207 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 IVS+K K+I Sbjct: 99 IVSKKNKDI 107>NP_001130002 Length = 409 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 IVS+K K+I Sbjct: 111 IVSKKNKDI 119>NP_001158307 Length = 865 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SRKQKEI 9 SR+QKEI Sbjct: 503 SRRQKEI 509>NP_061952 Length = 865 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SRKQKEI 9 SR+QKEI Sbjct: 503 SRRQKEI 509>NP_003875 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 ++ +KQKEI Sbjct: 661 VIIKKQKEI 669>NP_001268861 Length = 1143 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSRKQKE 8 +SRKQKE Sbjct: 42 LSRKQKE 48>NP_060230 Length = 1143 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSRKQKE 8 +SRKQKE Sbjct: 42 LSRKQKE 48>NP_001268862 Length = 1156 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSRKQKE 8 +SRKQKE Sbjct: 42 LSRKQKE 48>XP_006716097 Length = 1028 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSRKQKE 8 +SRKQKE Sbjct: 42 LSRKQKE 48>XP_005249604 Length = 1096 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSRKQKE 8 +SRKQKE Sbjct: 42 LSRKQKE 48>XP_005265585 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 ++ +KQKEI Sbjct: 661 VIIKKQKEI 669>XP_005246699 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 IVS+K K+I Sbjct: 99 IVSKKNKDI 107>XP_005246698 Length = 410 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 IVS+K K+I Sbjct: 111 IVSKKNKDI 119>NP_005742 Length = 3907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSRKQKEI 9 + RK+KEI Sbjct: 2198 IDRKEKEI 2205>NP_671714 Length = 3899 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSRKQKEI 9 + RK+KEI Sbjct: 2190 IDRKEKEI 2197>NP_006277 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 136 IISKEKKEI 144>NP_001171612 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 99 IISKEKKEI 107>NP_001171609 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 136 IISKEKKEI 144>NP_001171611 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 168 IISKEKKEI 176>NP_009042 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 181 IISKEKKEI 189>NP_001171613 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 60 IISKEKKEI 68>NP_001171610 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 196 IISKEKKEI 204>NP_001127911 Length = 1253 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IVSRKQK 7 IVSRK+K Sbjct: 758 IVSRKEK 764>NP_001127910 Length = 1253 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IVSRKQK 7 IVSRK+K Sbjct: 758 IVSRKEK 764>NP_665696 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IVSRKQK 7 IVSRK+K Sbjct: 715 IVSRKEK 721>NP_001074319 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKQKEI 9 RKQKEI Sbjct: 148 RKQKEI 153>NP_003117 Length = 2419 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKQKEI 9 RKQKEI Sbjct: 2201 RKQKEI 2206>NP_060169 Length = 827 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V R+QKE+ Sbjct: 95 VVVRQQKEV 103>NP_001073879 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSRKQKEI 9 +SRKQ+E+ Sbjct: 297 LSRKQQEV 304>XP_005268388 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 86 IISKEKKEI 94>XP_006720041 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 86 IISKEKKEI 94>XP_006720040 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 86 IISKEKKEI 94>XP_005268387 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 181 IISKEKKEI 189>XP_005268385 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 181 IISKEKKEI 189>XP_005268384 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 181 IISKEKKEI 189>XP_005268383 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 181 IISKEKKEI 189>XP_006715890 Length = 3860 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSRKQKEI 9 + RK+KEI Sbjct: 2151 IDRKEKEI 2158>XP_005250160 Length = 3939 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSRKQKEI 9 + RK+KEI Sbjct: 2230 IDRKEKEI 2237>XP_005250159 Length = 3952 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSRKQKEI 9 + RK+KEI Sbjct: 2243 IDRKEKEI 2250>XP_005247792 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 99 IISKEKKEI 107>XP_006713800 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 100 IISKEKKEI 108>XP_005247791 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 100 IISKEKKEI 108>XP_005247790 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 100 IISKEKKEI 108>XP_005247788 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 I+S+++KEI Sbjct: 197 IISKEKKEI 205>XP_006713743 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V R+QKE+ Sbjct: 95 VVVRQQKEV 103>XP_006713742 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V R+QKE+ Sbjct: 95 VVVRQQKEV 103>XP_006713741 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V R+QKE+ Sbjct: 95 VVVRQQKEV 103>XP_005247615 Length = 832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V R+QKE+ Sbjct: 95 VVVRQQKEV 103>XP_006713740 Length = 848 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V R+QKE+ Sbjct: 95 VVVRQQKEV 103>XP_006713739 Length = 849 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V R+QKE+ Sbjct: 95 VVVRQQKEV 103>XP_006713738 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 +V R+QKE+ Sbjct: 95 VVVRQQKEV 103>XP_005265144 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 I+ +KQKE+ Sbjct: 515 ILKQKQKEV 523>XP_006712013 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSRKQKEI 9 +SRKQ+E+ Sbjct: 297 LSRKQQEV 304>NP_001127909 Length = 1237 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IVSRKQK 7 IVSRK+K Sbjct: 742 IVSRKEK 748>NP_055068 Length = 2725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SRKQKEI 9 SRK+KE+ Sbjct: 61 SRKRKEV 67>NP_001156750 Length = 2732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SRKQKEI 9 SRK+KE+ Sbjct: 61 SRKRKEV 67>NP_114432 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IVSRKQK 7 I+SRK+K Sbjct: 962 IISRKEK 968>NP_001156751 Length = 2731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SRKQKEI 9 SRK+KE+ Sbjct: 61 SRKRKEV 67>NP_653319 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SRKQKEI 9 SRKQK++ Sbjct: 287 SRKQKQL 293>NP_001136025 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSRKQKEI 9 + +KQKEI Sbjct: 695 IKQKQKEI 702>NP_060672 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RKQKEI 9 RKQKE+ Sbjct: 181 RKQKEV 186>NP_004876 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 +VSRK+++I Sbjct: 366 VVSRKKQKI 374>NP_899631 Length = 1314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IVSRKQKE 8 +VS K+KE Sbjct: 96 VVSEKEKE 103>NP_899630 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IVSRKQKE 8 +VS K+KE Sbjct: 96 VVSEKEKE 103>NP_003707 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IVSRKQKE 8 +VS K+KE Sbjct: 96 VVSEKEKE 103>NP_001138228 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 +VSRK+++I Sbjct: 267 VVSRKKQKI 275>NP_444264 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IVSRKQKEI 9 +VSRK+++I Sbjct: 264 VVSRKKQKI 272>NP_001265424 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IVSRKQKE 8 +VSRK+K+ Sbjct: 866 LVSRKEKK 873>XP_005270192 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IVSRKQKE 8 +VSRK+K+ Sbjct: 866 LVSRKEKK 873>XP_005270168 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IVSRKQKE 8 +VSRK+K+ Sbjct: 744 LVSRKEKK 751>XP_006713578 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SRKQKEI 9 SRKQK++ Sbjct: 287 SRKQKQL 293>XP_005245988 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RKQKEI 9 RKQKE+ Sbjct: 181 RKQKEV 186>NP_061063 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IVSRKQKEI 9 I S+KQ+EI Sbjct: 472 IHSKKQREI 480>NP_001092808 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IVSRKQKE 8 +VSRK+K+ Sbjct: 866 LVSRKEKK 873Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.130 0.295 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 563,433 Number of extensions: 1046 Number of successful extensions: 80 Number of sequences better than 10000.0: 80 Number of HSP's gapped: 80 Number of HSP's successfully gapped: 80 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |