Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 20 390 XP_005273301 17 3301 NP_003263 17 3301 NP_077306 16 5631 NP_055901 16 5631 NP_057411 16 5631 XP_005276791 16 5631 XP_005261690 16 5631 XP_005244909 16 5631 NP_001934 16 7355 NP_001010860 16 7355 NP_001182180 15 9605 NP_778239 15 9605 NP_001182181 15 9605 NP_000775 15 9605 NP_064550 15 9605 NP_001182183 15 9605 NP_056359 15 9605 NP_001182178 15 9605 NP_001028676 15 9605 NP_001275517 15 9605 NP_778243 15 9605 NP_001182179 15 9605 NP_001002843 15 9605 NP_060131 15 9605 NP_001182177 15 9605 NP_848642 15 9605 NP_001070142 15 9605 NP_000479 15 9605 XP_005257707 15 9605 XP_005254541 15 9605 XP_005254540 15 9605 XP_005254538 15 9605 XP_006716855 15 9605 XP_006716854 15 9605 XP_006716799 15 9605 XP_005251452 15 9605 XP_005251451 15 9605 XP_005251450 15 9605 XP_006716798 15 9605 XP_006716797 15 9605 XP_006716796 15 9605 XP_005245255 15 9605 XP_005270859 15 9605 XP_005270858 15 9605 XP_005270856 15 9605 NP_803190 15 9605 NP_077012 15 9605 NP_001028260 15 9605>NP_115803 Length = 1156 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IVIKSKYSP 9 IVIKS+YSP Sbjct: 362 IVIKSEYSP 370>XP_005273301 Length = 323 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KSKYSP 9 KSKYSP Sbjct: 144 KSKYSP 149>NP_003263 Length = 399 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KSKYSP 9 KSKYSP Sbjct: 144 KSKYSP 149>NP_077306 Length = 730 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IVIKSKYS 8 +V+KSK+S Sbjct: 396 VVLKSKFS 403>NP_055901 Length = 711 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IVIKSKYSP 9 +VI+S+Y P Sbjct: 460 VVIRSQYVP 468>NP_057411 Length = 384 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSKYSP 9 +KS YSP Sbjct: 373 VKSNYSP 379>XP_005276791 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IVIKSKYS 8 +V+KSK+S Sbjct: 156 VVLKSKFS 163>XP_005261690 Length = 316 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSKYSP 9 +KS YSP Sbjct: 305 VKSNYSP 311>XP_005244909 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IVIKSKYS 8 +V+KSK+S Sbjct: 156 VVLKSKFS 163>NP_001934 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSKYSP 9 I+SKY P Sbjct: 364 IRSKYKP 370>NP_001010860 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IKSKYS 8 IKSKYS Sbjct: 428 IKSKYS 433>NP_001182180 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IVIKSKY 7 +VIK KY Sbjct: 189 VVIKDKY 195>NP_778239 Length = 306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IVIKSKY 7 +VIK KY Sbjct: 203 VVIKDKY 209>NP_001182181 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IVIKSKY 7 +VIK KY Sbjct: 131 VVIKDKY 137>NP_000775 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IVIKSKYSP 9 ++ K+KY P Sbjct: 86 VLYKAKYGP 94>NP_064550 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KSKYSP 9 KSK+SP Sbjct: 154 KSKFSP 159>NP_001182183 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IVIKSKY 7 +VIK KY Sbjct: 135 VVIKDKY 141>NP_056359 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VIKSKYSP 9 V+KS Y P Sbjct: 142 VVKSMYPP 149>NP_001182178 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IVIKSKY 7 +VIK KY Sbjct: 189 VVIKDKY 195>NP_001028676 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VIKSKYSP 9 V+KS Y P Sbjct: 142 VVKSMYPP 149>NP_001275517 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 KSKYSP 9 KSKY P Sbjct: 584 KSKYKP 589>NP_778243 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IVIKSKY 7 +VIK KY Sbjct: 189 VVIKDKY 195>NP_001182179 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IVIKSKY 7 +VIK KY Sbjct: 149 VVIKDKY 155>NP_001002843 Length = 966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 KSKYSP 9 KSKY P Sbjct: 571 KSKYKP 576>NP_060131 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 KSKYSP 9 KSKY P Sbjct: 584 KSKYKP 589>NP_001182177 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IVIKSKY 7 +VIK KY Sbjct: 203 VVIKDKY 209>NP_848642 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSKYSP 9 IK+KY P Sbjct: 32 IKAKYPP 38>NP_001070142 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSKYSP 9 +KSKY P Sbjct: 199 LKSKYFP 205>NP_000479 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KSKYSP 9 KSK+SP Sbjct: 258 KSKFSP 263>XP_005257707 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSKYSP 9 +KSKY P Sbjct: 179 LKSKYFP 185>XP_005254541 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 KSKYSP 9 KSKY P Sbjct: 748 KSKYKP 753>XP_005254540 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 KSKYSP 9 KSKY P Sbjct: 748 KSKYKP 753>XP_005254538 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 KSKYSP 9 KSKY P Sbjct: 748 KSKYKP 753>XP_006716855 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IVIKSKY 7 +VIK KY Sbjct: 101 VVIKDKY 107>XP_006716854 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IVIKSKY 7 +VIK KY Sbjct: 189 VVIKDKY 195>XP_006716799 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IKSKYSP 9 +KS++SP Sbjct: 249 VKSRFSP 255>XP_005251452 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IKSKYSP 9 +KS++SP Sbjct: 249 VKSRFSP 255>XP_005251451 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IKSKYSP 9 +KS++SP Sbjct: 249 VKSRFSP 255>XP_005251450 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IKSKYSP 9 +KS++SP Sbjct: 249 VKSRFSP 255>XP_006716798 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IKSKYSP 9 +KS++SP Sbjct: 278 VKSRFSP 284>XP_006716797 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IKSKYSP 9 +KS++SP Sbjct: 278 VKSRFSP 284>XP_006716796 Length = 401 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IKSKYSP 9 +KS++SP Sbjct: 290 VKSRFSP 296>XP_005245255 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KSKYSP 9 KSK+SP Sbjct: 210 KSKFSP 215>XP_005270859 Length = 141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSKYSP 9 IK+KY P Sbjct: 32 IKAKYPP 38>XP_005270858 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSKYSP 9 IK+KY P Sbjct: 32 IKAKYPP 38>XP_005270856 Length = 172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSKYSP 9 IK+KY P Sbjct: 32 IKAKYPP 38>NP_803190 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSKYSP 9 +KSKY P Sbjct: 179 LKSKYFP 185>NP_077012 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IKSKYSP 9 +KSKY P Sbjct: 179 LKSKYFP 185>NP_001028260 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VIKSKYSP 9 V+KSK+ P Sbjct: 121 VLKSKFLP 128Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.132 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 453,275 Number of extensions: 388 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |