Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 18 1935 XP_005250103 18 1935 XP_005250102 18 1935 NP_000050 17 4312 NP_001274744 16 7355 NP_001120792 16 7355 NP_001274745 16 7355 NP_055662 16 7355 NP_653080 16 7355 XP_005267291 16 7355 XP_006711752 16 7355 XP_006711750 16 7355 XP_006711749 16 7355 XP_005245731 16 7355 XP_005245730 16 7355 XP_005245729 16 7355 XP_005245727 16 7355 XP_005245726 16 7355 XP_005245725 16 7355 XP_005245724 16 7355 XP_005245715 16 7355 XP_006711748 16 7355 XP_006711747 16 7355 XP_006711746 16 7355 XP_006711745 16 7355 XP_006711744 16 7355 XP_006711743 16 7355 XP_006711742 16 7355 NP_002401 15 9605 NP_795352 15 9605 NP_055026 15 9605 XP_005265931 15 9605 XP_005265930 15 9605 XP_005265929 15 9605 XP_005263727 15 9605 XP_005263726 15 9605 XP_006712598 15 9605 XP_005263725 15 9605 XP_006712597 15 9605 XP_005263723 15 9605 XP_005245867 15 9605 XP_006710340 15 9605 XP_005270398 15 9605 XP_006710339 15 9605 XP_006710338 15 9605 NP_000929 15 9605 NP_057132 15 9605 NP_001276 15 9605>NP_004324 Length = 766 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITVGQRIVS 9 ITVGQRI S Sbjct: 457 ITVGQRIGS 465>XP_005250103 Length = 758 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITVGQRIVS 9 ITVGQRI S Sbjct: 457 ITVGQRIGS 465>XP_005250102 Length = 767 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITVGQRIVS 9 ITVGQRI S Sbjct: 457 ITVGQRIGS 465>NP_000050 Length = 3418 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ITVGQRIV 8 +TVGQ+I+ Sbjct: 2745 LTVGQKII 2752>NP_001274744 Length = 976 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 269 ITAGQRI 275>NP_001120792 Length = 983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 276 ITAGQRI 282>NP_001274745 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 287 ITAGQRI 293>NP_055662 Length = 1087 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 276 ITAGQRI 282>NP_653080 Length = 1684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ITVGQR 6 ITVGQR Sbjct: 7 ITVGQR 12>XP_005267291 Length = 1684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ITVGQR 6 ITVGQR Sbjct: 7 ITVGQR 12>XP_006711752 Length = 1085 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 276 ITAGQRI 282>XP_006711750 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 46 ITAGQRI 52>XP_006711749 Length = 965 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 81 ITAGQRI 87>XP_005245731 Length = 983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 276 ITAGQRI 282>XP_005245730 Length = 994 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 287 ITAGQRI 293>XP_005245729 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 276 ITAGQRI 282>XP_005245727 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 287 ITAGQRI 293>XP_005245726 Length = 1095 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 287 ITAGQRI 293>XP_005245725 Length = 1096 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 287 ITAGQRI 293>XP_005245724 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 287 ITAGQRI 293>XP_005245715 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 287 ITAGQRI 293>XP_006711748 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 276 ITAGQRI 282>XP_006711747 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 276 ITAGQRI 282>XP_006711746 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 276 ITAGQRI 282>XP_006711745 Length = 1170 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 287 ITAGQRI 293>XP_006711744 Length = 1171 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 287 ITAGQRI 293>XP_006711743 Length = 1171 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 287 ITAGQRI 293>XP_006711742 Length = 1171 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITVGQRI 7 IT GQRI Sbjct: 287 ITAGQRI 293>NP_002401 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TVGQRIV 8 TVG RIV Sbjct: 340 TVGDRIV 346>NP_795352 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITVGQRIVS 9 + VG RIVS Sbjct: 1721 LKVGDRIVS 1729>NP_055026 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ITVGQRIV 8 +TVG R++ Sbjct: 133 VTVGNRLI 140>XP_005265931 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ITVGQRIV 8 +TVG R++ Sbjct: 133 VTVGNRLI 140>XP_005265930 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ITVGQRIV 8 +TVG R++ Sbjct: 133 VTVGNRLI 140>XP_005265929 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ITVGQRIV 8 +TVG R++ Sbjct: 54 VTVGNRLI 61>XP_005263727 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TVGQRIV 8 TVG RIV Sbjct: 340 TVGDRIV 346>XP_005263726 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TVGQRIV 8 TVG RIV Sbjct: 340 TVGDRIV 346>XP_006712598 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TVGQRIV 8 TVG RIV Sbjct: 340 TVGDRIV 346>XP_005263725 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TVGQRIV 8 TVG RIV Sbjct: 340 TVGDRIV 346>XP_006712597 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TVGQRIV 8 TVG RIV Sbjct: 340 TVGDRIV 346>XP_005263723 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TVGQRIV 8 TVG RIV Sbjct: 340 TVGDRIV 346>XP_005245867 Length = 1201 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 ITVGQRIV 8 ++VGQR++ Sbjct: 155 VSVGQRVL 162>XP_006710340 Length = 1815 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITVGQRIVS 9 + VG RIVS Sbjct: 1735 LKVGDRIVS 1743>XP_005270398 Length = 1882 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITVGQRIVS 9 + VG RIVS Sbjct: 1721 LKVGDRIVS 1729>XP_006710339 Length = 1896 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITVGQRIVS 9 + VG RIVS Sbjct: 1735 LKVGDRIVS 1743>XP_006710338 Length = 1896 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITVGQRIVS 9 + VG RIVS Sbjct: 1735 LKVGDRIVS 1743>NP_000929 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VGQRIVS 9 +GQRIV+ Sbjct: 252 IGQRIVA 258>NP_057132 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ITVGQRIV 8 I+VGQR++ Sbjct: 137 ISVGQRLL 144>NP_001276 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ITVGQRIV 8 + +GQRIV Sbjct: 300 LQIGQRIV 307Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.140 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 431,976 Number of extensions: 552 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |