Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 20 509 NP_001243397 20 509 XP_005269721 20 509 NP_689845 18 1935 NP_056078 17 2528 NP_001167587 17 2528 NP_001167588 17 2528 XP_005254315 17 2528 XP_005254314 17 2528 XP_006720509 17 2528 XP_005254313 17 2528 XP_005254312 17 2528 NP_001073936 17 3301 NP_036260 17 3301 XP_006710516 17 3301 NP_003483 16 5631 NP_065759 16 5631 NP_001128243 16 5631 NP_001934 16 7355 NP_001093328 16 7355 XP_005249901 16 7355 NP_076959 16 7355 NP_004632 15 9605 NP_001182555 15 9605 NP_997257 15 9605 NP_001186072 15 9605 NP_543155 15 9605 NP_775840 15 9605 XP_005262140 15 9605 XP_005252669 15 9605 XP_006717572 15 9605 XP_005252667 15 9605 XP_005252666 15 9605 XP_005252665 15 9605 XP_005252663 15 9605 XP_005252662 15 9605 XP_006715979 15 9605 XP_005250306 15 9605>NP_036462 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ITTSSTYIS 9 ITT+STYIS Sbjct: 413 ITTTSTYIS 421>NP_001243397 Length = 1890 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ITTSSTYIS 9 ITT+STYIS Sbjct: 413 ITTTSTYIS 421>XP_005269721 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ITTSSTYIS 9 ITT+STYIS Sbjct: 413 ITTTSTYIS 421>NP_689845 Length = 976 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ITTSSTYIS 9 + TSSTYIS Sbjct: 803 LPTSSTYIS 811>NP_056078 Length = 3036 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TSSTYIS 9 TSSTYIS Sbjct: 1764 TSSTYIS 1770>NP_001167587 Length = 3037 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TSSTYIS 9 TSSTYIS Sbjct: 1764 TSSTYIS 1770>NP_001167588 Length = 2400 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TSSTYIS 9 TSSTYIS Sbjct: 1128 TSSTYIS 1134>XP_005254315 Length = 2576 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TSSTYIS 9 TSSTYIS Sbjct: 1764 TSSTYIS 1770>XP_005254314 Length = 2605 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TSSTYIS 9 TSSTYIS Sbjct: 1764 TSSTYIS 1770>XP_006720509 Length = 2646 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TSSTYIS 9 TSSTYIS Sbjct: 1764 TSSTYIS 1770>XP_005254313 Length = 3057 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TSSTYIS 9 TSSTYIS Sbjct: 1764 TSSTYIS 1770>XP_005254312 Length = 3058 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TSSTYIS 9 TSSTYIS Sbjct: 1764 TSSTYIS 1770>NP_001073936 Length = 1848 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ITTSSTYI 8 +TTS TY+ Sbjct: 382 VTTSETYV 389>NP_036260 Length = 919 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ITTSSTYI 8 +TT+STY+ Sbjct: 56 VTTASTYL 63>XP_006710516 Length = 514 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ITTSSTYI 8 +TT+STY+ Sbjct: 56 VTTASTYL 63>NP_003483 Length = 261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TTSSTYIS 9 TTS+TY++ Sbjct: 188 TTSATYLA 195>NP_065759 Length = 1116 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTSSTYIS 9 TTS+ YIS Sbjct: 441 TTSAVYIS 448>NP_001128243 Length = 1139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTSSTYIS 9 TTS+ YIS Sbjct: 464 TTSAVYIS 471>NP_001934 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ITTSSTYIS 9 ITTSST ++ Sbjct: 1100 ITTSSTRVT 1108>NP_001093328 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITTSSTYIS 9 ITT TY+S Sbjct: 310 ITTLITYVS 318>XP_005249901 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITTSSTYIS 9 ITT TY+S Sbjct: 252 ITTLITYVS 260>NP_076959 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITTSSTYIS 9 ITT TY+S Sbjct: 252 ITTLITYVS 260>NP_004632 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ITTSSTYIS 9 +TT TY S Sbjct: 261 VTTEKTYTS 269>NP_001182555 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ITTSSTYIS 9 +TT TY S Sbjct: 261 VTTEKTYTS 269>NP_997257 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITTSSTYI 8 ITTS T+I Sbjct: 205 ITTSYTFI 212>NP_001186072 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSTYIS 9 SSTYIS Sbjct: 216 SSTYIS 221>NP_543155 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ITTSSTYIS 9 +TTSST+ S Sbjct: 243 LTTSSTHKS 251>NP_775840 Length = 1347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TTSSTYIS 9 TTSS Y++ Sbjct: 1008 TTSSNYLA 1015>XP_005262140 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ITTSSTYIS 9 +TTSST+ S Sbjct: 243 LTTSSTHKS 251>XP_005252669 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ITTSSTYIS 9 +TT TY S Sbjct: 261 VTTEKTYTS 269>XP_006717572 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ITTSSTYIS 9 +TT TY S Sbjct: 261 VTTEKTYTS 269>XP_005252667 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ITTSSTYIS 9 +TT TY S Sbjct: 229 VTTEKTYTS 237>XP_005252666 Length = 1057 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ITTSSTYIS 9 +TT TY S Sbjct: 261 VTTEKTYTS 269>XP_005252665 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ITTSSTYIS 9 +TT TY S Sbjct: 261 VTTEKTYTS 269>XP_005252663 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ITTSSTYIS 9 +TT TY S Sbjct: 261 VTTEKTYTS 269>XP_005252662 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ITTSSTYIS 9 +TT TY S Sbjct: 261 VTTEKTYTS 269>XP_006715979 Length = 1136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TTSSTYIS 9 TTSS Y++ Sbjct: 797 TTSSNYLA 804>XP_005250306 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TTSSTYIS 9 TTSS Y++ Sbjct: 831 TTSSNYLA 838Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.107 0.252 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 337,984 Number of extensions: 372 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |