Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 18 1135 NP_444254 18 1135 NP_444253 18 1135 NP_444255 18 1135 XP_005247551 18 1135 XP_005247550 18 1135 XP_006713712 18 1135 XP_005247549 18 1135 NP_113617 17 4312 NP_001015508 17 4312 NP_005413 17 4312 NP_001257369 17 4312 XP_006722982 17 4312 XP_005260146 17 4312 XP_005271710 17 4312 XP_005273541 17 4312 XP_005273540 17 4312 NP_037489 17 4312 NP_079110 16 5631 NP_001243307 16 5631 NP_001243308 16 5631 NP_057107 16 5631 XP_006724218 16 5631 XP_006724217 16 5631 XP_005270214 16 5631 NP_689726 16 5631 NP_055764 16 7355 NP_690007 16 7355 NP_003376 16 7355 NP_003276 16 7355 NP_690008 16 7355 NP_071907 16 7355 XP_005259213 16 7355 XP_005259212 16 7355 XP_005259211 16 7355 XP_006723388 16 7355 XP_005259210 16 7355 XP_006723387 16 7355 XP_005259209 16 7355 NP_690009 16 7355 NP_000648 15 9605 NP_000624 15 9605 NP_694545 15 9605 NP_689916 15 9605 NP_001244068 15 9605 NP_000076 15 9605 NP_057341 15 9605 NP_001159417 15 9605 NP_001269325 15 9605 NP_004061 15 9605 XP_006722586 15 9605 XP_006715953 15 9605 XP_006715952 15 9605 XP_005250250 15 9605 XP_006715951 15 9605 XP_005250248 15 9605 XP_005270849 15 9605 XP_005245790 15 9605 XP_006710134 15 9605 XP_006710132 15 9605 NP_001167579 15 9605 NP_001036169 15 9605 NP_002134 15 9605>NP_444256 Length = 1794 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 ITS GRFLL Sbjct: 73 ITSGGRFLL 81>NP_444254 Length = 1845 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 ITS GRFLL Sbjct: 73 ITSGGRFLL 81>NP_444253 Length = 1914 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 ITS GRFLL Sbjct: 73 ITSGGRFLL 81>NP_444255 Length = 1863 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 ITS GRFLL Sbjct: 73 ITSGGRFLL 81>XP_005247551 Length = 1855 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 ITS GRFLL Sbjct: 83 ITSGGRFLL 91>XP_005247550 Length = 1856 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 ITS GRFLL Sbjct: 83 ITSGGRFLL 91>XP_006713712 Length = 1923 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 ITS GRFLL Sbjct: 83 ITSGGRFLL 91>XP_005247549 Length = 1924 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 ITS GRFLL Sbjct: 83 ITSGGRFLL 91>NP_113617 Length = 261 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSRGRF 7 TSRGRF Sbjct: 11 TSRGRF 16>NP_001015508 Length = 322 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSRGRFL 8 +SRGRFL Sbjct: 79 SSRGRFL 85>NP_005413 Length = 2155 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSRGRFL 8 TSRG+FL Sbjct: 261 TSRGQFL 267>NP_001257369 Length = 205 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSRGRF 7 TSRGRF Sbjct: 11 TSRGRF 16>XP_006722982 Length = 255 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSRGRF 7 TSRGRF Sbjct: 11 TSRGRF 16>XP_005260146 Length = 286 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TSRGRF 7 TSRGRF Sbjct: 11 TSRGRF 16>XP_005271710 Length = 2150 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSRGRFL 8 TSRG+FL Sbjct: 261 TSRGQFL 267>XP_005273541 Length = 322 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSRGRFL 8 +SRGRFL Sbjct: 79 SSRGRFL 85>XP_005273540 Length = 347 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSRGRFL 8 +SRGRFL Sbjct: 79 SSRGRFL 85>NP_037489 Length = 347 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TSRGRFL 8 +SRGRFL Sbjct: 79 SSRGRFL 85>NP_079110 Length = 642 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITSRGRFLL 9 ITS GR LL Sbjct: 507 ITSEGRSLL 515>NP_001243307 Length = 640 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITSRGRFLL 9 ITS GR LL Sbjct: 505 ITSEGRSLL 513>NP_001243308 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITSRGRFLL 9 ITS GR LL Sbjct: 332 ITSEGRSLL 340>NP_057107 Length = 323 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TSRGRFLL 9 TSR RFLL Sbjct: 14 TSRCRFLL 21>XP_006724218 Length = 1200 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITSRGRFLL 9 I RG+FLL Sbjct: 455 ILQRGKFLL 463>XP_006724217 Length = 1235 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITSRGRFLL 9 I RG+FLL Sbjct: 455 ILQRGKFLL 463>XP_005270214 Length = 587 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITSRGRFLL 9 ITS GR LL Sbjct: 507 ITSEGRSLL 515>NP_689726 Length = 1274 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITSRGRFLL 9 I RG+FLL Sbjct: 494 ILQRGKFLL 502>NP_055764 Length = 614 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 ITSRGRFL 8 +++RGRF+ Sbjct: 137 VSTRGRFM 144>NP_690007 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITSRGRFL 8 +TSRGR L Sbjct: 170 LTSRGRTL 177>NP_003376 Length = 191 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ITSRGRF 7 ITSRG F Sbjct: 91 ITSRGSF 97>NP_003276 Length = 1358 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 ITS+GR+ L Sbjct: 1218 ITSQGRYEL 1226>NP_690008 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITSRGRFL 8 +TSRGR L Sbjct: 172 LTSRGRTL 179>NP_071907 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITSRGRFL 8 +TSRGR L Sbjct: 103 LTSRGRTL 110>XP_005259213 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITSRGRFL 8 +TSRGR L Sbjct: 216 LTSRGRTL 223>XP_005259212 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITSRGRFL 8 +TSRGR L Sbjct: 216 LTSRGRTL 223>XP_005259211 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITSRGRFL 8 +TSRGR L Sbjct: 103 LTSRGRTL 110>XP_006723388 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITSRGRFL 8 +TSRGR L Sbjct: 103 LTSRGRTL 110>XP_005259210 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITSRGRFL 8 +TSRGR L Sbjct: 121 LTSRGRTL 128>XP_006723387 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITSRGRFL 8 +TSRGR L Sbjct: 170 LTSRGRTL 177>XP_005259209 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITSRGRFL 8 +TSRGR L Sbjct: 216 LTSRGRTL 223>NP_690009 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITSRGRFL 8 +TSRGR L Sbjct: 103 LTSRGRTL 110>NP_000648 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TSRGRF 7 T+RGRF Sbjct: 125 TARGRF 130>NP_000624 Length = 239 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TSRGRF 7 T+RGRF Sbjct: 125 TARGRF 130>NP_694545 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SRGRFLL 9 +RGR+LL Sbjct: 431 ARGRYLL 437>NP_689916 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 I +RG+FL+ Sbjct: 537 IMTRGKFLV 545>NP_001244068 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITSRGR 6 +TSRGR Sbjct: 615 VTSRGR 620>NP_000076 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITSRGR 6 +TSRGR Sbjct: 658 VTSRGR 663>NP_057341 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ITSRGRF 7 +TSRG F Sbjct: 91 VTSRGSF 97>NP_001159417 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITSRGR 6 +TSRGR Sbjct: 488 VTSRGR 493>NP_001269325 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ITSRGRF 7 +TSRG F Sbjct: 91 VTSRGSF 97>NP_004061 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITSRGR 6 +TSRGR Sbjct: 658 VTSRGR 663>XP_006722586 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TSRGRF 7 T+RGRF Sbjct: 125 TARGRF 130>XP_006715953 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 I +RG+FL+ Sbjct: 537 IMTRGKFLV 545>XP_006715952 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 I +RG+FL+ Sbjct: 537 IMTRGKFLV 545>XP_005250250 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 I +RG+FL+ Sbjct: 537 IMTRGKFLV 545>XP_006715951 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 I +RG+FL+ Sbjct: 537 IMTRGKFLV 545>XP_005250248 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ITSRGRFLL 9 I +RG+FL+ Sbjct: 537 IMTRGKFLV 545>XP_005270849 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITSRGR 6 +TSRGR Sbjct: 91 VTSRGR 96>XP_005245790 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITSRGR 6 +TSRGR Sbjct: 657 VTSRGR 662>XP_006710134 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITSRGR 6 +TSRGR Sbjct: 305 VTSRGR 310>XP_006710132 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITSRGR 6 +TSRGR Sbjct: 489 VTSRGR 494>NP_001167579 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RGRFLL 9 RGRFL+ Sbjct: 244 RGRFLI 249>NP_001036169 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITSRGR 6 +TSRGR Sbjct: 657 VTSRGR 662>NP_002134 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITSRGR 6 +TSRGR Sbjct: 91 VTSRGR 96Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.156 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 497,804 Number of extensions: 691 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |