Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 19 665 NP_000240 19 665 XP_005265218 19 665 NP_001243599 18 1935 NP_569710 18 1935 NP_005691 18 1935 NP_079390 17 3301 XP_006719673 17 3301 XP_005269218 17 3301 XP_005269217 17 3301 XP_006719672 17 3301 XP_005269215 17 3301 XP_006722374 16 5631 XP_006722373 16 5631 XP_006722370 16 5631 XP_006722365 16 5631 NP_006337 16 7355 NP_056496 16 7355 NP_001106853 16 7355 NP_065928 16 7355 XP_005256667 16 7355 XP_005256666 16 7355 XP_005256665 16 7355 XP_005256664 16 7355 XP_005256662 16 7355 XP_005256527 16 7355 XP_006719819 16 7355 XP_006712889 16 7355 NP_892006 15 9605 NP_149062 15 9605 XP_006715488 15 9605 XP_006715487 15 9605 XP_006715486 15 9605 XP_006715485 15 9605 XP_006715484 15 9605 XP_006715483 15 9605 XP_006715482 15 9605 XP_006715481 15 9605 XP_006715480 15 9605 XP_006715479 15 9605 XP_006715478 15 9605 XP_006715477 15 9605 XP_006715476 15 9605 XP_006715475 15 9605 XP_006715474 15 9605 XP_006715473 15 9605 XP_006715472 15 9605 XP_006715471 15 9605 XP_006715470 15 9605>NP_001245200 Length = 687 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TSKLQSFE 9 TSKLQSFE Sbjct: 82 TSKLQSFE 89>NP_000240 Length = 756 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TSKLQSFE 9 TSKLQSFE Sbjct: 82 TSKLQSFE 89>XP_005265218 Length = 687 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TSKLQSFE 9 TSKLQSFE Sbjct: 82 TSKLQSFE 89>NP_001243599 Length = 707 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ITSKLQSFE 9 +TSKL+S+E Sbjct: 200 VTSKLKSYE 208>NP_569710 Length = 737 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ITSKLQSFE 9 +TSKL+S+E Sbjct: 230 VTSKLKSYE 238>NP_005691 Length = 737 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ITSKLQSFE 9 +TSKL+S+E Sbjct: 230 VTSKLKSYE 238>NP_079390 Length = 2479 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITSKLQSFE 9 ITSKLQ E Sbjct: 1224 ITSKLQKME 1232>XP_006719673 Length = 1997 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITSKLQSFE 9 ITSKLQ E Sbjct: 742 ITSKLQKME 750>XP_005269218 Length = 2009 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITSKLQSFE 9 ITSKLQ E Sbjct: 754 ITSKLQKME 762>XP_005269217 Length = 2353 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITSKLQSFE 9 ITSKLQ E Sbjct: 1255 ITSKLQKME 1263>XP_006719672 Length = 2510 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITSKLQSFE 9 ITSKLQ E Sbjct: 1255 ITSKLQKME 1263>XP_005269215 Length = 2510 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ITSKLQSFE 9 ITSKLQ E Sbjct: 1255 ITSKLQKME 1263>XP_006722374 Length = 944 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSKLQSFE 9 T K+QSFE Sbjct: 728 TIKMQSFE 735>XP_006722373 Length = 948 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSKLQSFE 9 T K+QSFE Sbjct: 732 TIKMQSFE 739>XP_006722370 Length = 956 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSKLQSFE 9 T K+QSFE Sbjct: 740 TIKMQSFE 747>XP_006722365 Length = 981 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSKLQSFE 9 T K+QSFE Sbjct: 765 TIKMQSFE 772>NP_006337 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKLQSFE 9 SKL+SFE Sbjct: 460 SKLKSFE 466>NP_056496 Length = 204 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSKLQSF 8 TSKLQ F Sbjct: 127 TSKLQKF 133>NP_001106853 Length = 2093 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KLQSFE 9 KLQSFE Sbjct: 1666 KLQSFE 1671>NP_065928 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ITSKLQSFE 9 I KLQ FE Sbjct: 2570 INQKLQDFE 2578>XP_005256667 Length = 142 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSKLQSF 8 TSKLQ F Sbjct: 127 TSKLQKF 133>XP_005256666 Length = 153 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSKLQSF 8 TSKLQ F Sbjct: 127 TSKLQKF 133>XP_005256665 Length = 155 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSKLQSF 8 TSKLQ F Sbjct: 127 TSKLQKF 133>XP_005256664 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSKLQSF 8 TSKLQ F Sbjct: 127 TSKLQKF 133>XP_005256662 Length = 186 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSKLQSF 8 TSKLQ F Sbjct: 127 TSKLQKF 133>XP_005256527 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ITSKLQSFE 9 I KLQ FE Sbjct: 2570 INQKLQDFE 2578>XP_006719819 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKLQSFE 9 SKL+SFE Sbjct: 35 SKLKSFE 41>XP_006712889 Length = 2069 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KLQSFE 9 KLQSFE Sbjct: 1651 KLQSFE 1656>NP_892006 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7449 SKLQSF 7454>NP_149062 Length = 8749 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7378 SKLQSF 7383>XP_006715488 Length = 8721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7461 SKLQSF 7466>XP_006715487 Length = 8744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7461 SKLQSF 7466>XP_006715486 Length = 8758 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7461 SKLQSF 7466>XP_006715485 Length = 8793 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7408 SKLQSF 7413>XP_006715484 Length = 8794 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7409 SKLQSF 7414>XP_006715483 Length = 8795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7410 SKLQSF 7415>XP_006715482 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7449 SKLQSF 7454>XP_006715481 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7414 SKLQSF 7419>XP_006715480 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7414 SKLQSF 7419>XP_006715479 Length = 8804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7456 SKLQSF 7461>XP_006715478 Length = 8809 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7461 SKLQSF 7466>XP_006715477 Length = 8822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7437 SKLQSF 7442>XP_006715476 Length = 8823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7461 SKLQSF 7466>XP_006715475 Length = 8827 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7456 SKLQSF 7461>XP_006715474 Length = 8829 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7444 SKLQSF 7449>XP_006715473 Length = 8832 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7461 SKLQSF 7466>XP_006715472 Length = 8839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7454 SKLQSF 7459>XP_006715471 Length = 8842 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7457 SKLQSF 7462>XP_006715470 Length = 8846 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SKLQSF 8 SKLQSF Sbjct: 7461 SKLQSF 7466Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.122 0.286 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 354,222 Number of extensions: 601 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |