Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1135 NP_001075109 18 1135 NP_001136245 17 3301 NP_001136239 17 3301 NP_001136236 17 3301 NP_001136244 17 3301 NP_001136238 17 3301 NP_001136240 17 3301 NP_001136243 17 3301 NP_001136242 17 3301 NP_001136235 17 3301 NP_001136237 17 3301 NP_001136241 17 3301 NP_149045 17 3301 NP_001139146 17 3301 NP_001139147 17 3301 XP_006718013 17 3301 XP_006714450 17 3301 XP_006714449 17 3301 XP_006714448 17 3301 XP_006714447 17 3301 XP_006714446 17 3301 NP_055105 17 4312 XP_006717089 17 4312 XP_006717088 17 4312 NP_057305 16 5631 XP_005268514 16 5631 NP_001129115 16 5631 NP_001129116 16 5631 NP_000408 16 7355 NP_002408 16 7355 NP_001153115 16 7355 NP_060819 16 7355 NP_001139438 16 7355 NP_037498 16 7355 NP_060501 16 7355 NP_001128649 16 7355 NP_001128647 16 7355 NP_690869 16 7355 XP_005255016 16 7355 XP_005255015 16 7355 XP_005255014 16 7355 XP_006720666 16 7355 XP_006720665 16 7355 XP_005255012 16 7355 XP_006719300 16 7355 XP_006719299 16 7355 XP_005268701 16 7355 XP_006717927 16 7355 XP_005252503 16 7355 XP_005264894 16 7355 NP_001128648 16 7355 NP_001129496 15 9605 NP_938011 15 9605 NP_001276968 15 9605 NP_001276969 15 9605 NP_001276994 15 9605 NP_001122401 15 9605 NP_002933 15 9605 NP_620711 15 9605 NP_006835 15 9605 NP_057396 15 9605 NP_006323 15 9605 XP_005274596 15 9605 XP_005259774 15 9605 XP_005247007 15 9605 NP_115991 15 9605>NP_008835 Length = 4128 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITPLQAVDQ 9 ITPLQAV Q Sbjct: 2791 ITPLQAVAQ 2799>NP_001075109 Length = 4097 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITPLQAVDQ 9 ITPLQAV Q Sbjct: 2791 ITPLQAVAQ 2799>NP_001136245 Length = 1932 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 281 PIQAIDQ 287>NP_001136239 Length = 1915 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 266 PIQAIDQ 272>NP_001136236 Length = 1957 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_001136244 Length = 1677 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_001136238 Length = 1952 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_001136240 Length = 1935 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 281 PIQAIDQ 287>NP_001136243 Length = 1682 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 308 PIQAIDQ 314>NP_001136242 Length = 1539 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_001136235 Length = 1962 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 308 PIQAIDQ 314>NP_001136237 Length = 1886 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_001136241 Length = 1790 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 308 PIQAIDQ 314>NP_149045 Length = 1955 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_001139146 Length = 1004 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TPLQ VD+ Sbjct: 5 TPLQTVDR 12>NP_001139147 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TPLQ VD+ Sbjct: 5 TPLQTVDR 12>XP_006718013 Length = 1778 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 P+QA+DQ Sbjct: 303 PIQAIDQ 309>XP_006714450 Length = 732 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TPLQ VD+ Sbjct: 5 TPLQTVDR 12>XP_006714449 Length = 747 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TPLQ VD+ Sbjct: 5 TPLQTVDR 12>XP_006714448 Length = 804 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TPLQ VD+ Sbjct: 5 TPLQTVDR 12>XP_006714447 Length = 832 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TPLQ VD+ Sbjct: 5 TPLQTVDR 12>XP_006714446 Length = 847 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TPLQ VD+ Sbjct: 5 TPLQTVDR 12>NP_055105 Length = 1098 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ITPLQAVD 8 ITP+QAV+ Sbjct: 508 ITPVQAVN 515>XP_006717089 Length = 653 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ITPLQAVD 8 ITP+QAV+ Sbjct: 63 ITPVQAVN 70>XP_006717088 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ITPLQAVD 8 ITP+QAV+ Sbjct: 434 ITPVQAVN 441>NP_057305 Length = 460 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITPLQAVDQ 9 I P QAVD+ Sbjct: 216 IEPAQAVDE 224>XP_005268514 Length = 317 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITPLQAVDQ 9 I P QAVD+ Sbjct: 73 IEPAQAVDE 81>NP_001129115 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITPLQAVDQ 9 I P QAVD+ Sbjct: 223 IEPAQAVDE 231>NP_001129116 Length = 403 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITPLQAVDQ 9 I P QAVD+ Sbjct: 159 IEPAQAVDE 167>NP_000408 Length = 272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 +P+Q VDQ Sbjct: 111 SPMQPVDQ 118>NP_002408 Length = 3256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TP+Q +DQ Sbjct: 1801 TPVQKLDQ 1808>NP_001153115 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ITPLQAVDQ 9 + P+Q++DQ Sbjct: 247 VLPIQSLDQ 255>NP_060819 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ITPLQAVDQ 9 + P+Q++DQ Sbjct: 247 VLPIQSLDQ 255>NP_001139438 Length = 2896 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TP+Q +DQ Sbjct: 1441 TPVQKLDQ 1448>NP_037498 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITPLQAV 7 +TP+QAV Sbjct: 659 VTPVQAV 665>NP_060501 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TPLQAVDQ 9 TP AVDQ Sbjct: 454 TPTAAVDQ 461>NP_001128649 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPLQAVD 8 TPL AVD Sbjct: 160 TPLTAVD 166>NP_001128647 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPLQAVD 8 TPL AVD Sbjct: 256 TPLTAVD 262>NP_690869 Length = 660 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPLQAVD 8 TPL AVD Sbjct: 249 TPLTAVD 255>XP_005255016 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ITPLQAVDQ 9 + P+Q++DQ Sbjct: 247 VLPIQSLDQ 255>XP_005255015 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ITPLQAVDQ 9 + P+Q++DQ Sbjct: 247 VLPIQSLDQ 255>XP_005255014 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ITPLQAVDQ 9 + P+Q++DQ Sbjct: 247 VLPIQSLDQ 255>XP_006720666 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ITPLQAVDQ 9 + P+Q++DQ Sbjct: 247 VLPIQSLDQ 255>XP_006720665 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ITPLQAVDQ 9 + P+Q++DQ Sbjct: 247 VLPIQSLDQ 255>XP_005255012 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ITPLQAVDQ 9 + P+Q++DQ Sbjct: 247 VLPIQSLDQ 255>XP_006719300 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPLQAVD 8 TPL AVD Sbjct: 160 TPLTAVD 166>XP_006719299 Length = 660 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPLQAVD 8 TPL AVD Sbjct: 249 TPLTAVD 255>XP_005268701 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPLQAVD 8 TPL AVD Sbjct: 256 TPLTAVD 262>XP_006717927 Length = 2406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TP+Q +DQ Sbjct: 951 TPVQKLDQ 958>XP_005252503 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 +P+Q VDQ Sbjct: 111 SPMQPVDQ 118>XP_005264894 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TPLQAVDQ 9 TP AVDQ Sbjct: 373 TPTAAVDQ 380>NP_001128648 Length = 660 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPLQAVD 8 TPL AVD Sbjct: 249 TPLTAVD 255>NP_001129496 Length = 1474 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TP+QA+ + Sbjct: 1447 TPMQAISE 1454>NP_938011 Length = 1630 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TP+QA+ + Sbjct: 1603 TPMQAISE 1610>NP_001276968 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 PL+A+DQ Sbjct: 1237 PLRALDQ 1243>NP_001276969 Length = 1443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 PL+A+DQ Sbjct: 1237 PLRALDQ 1243>NP_001276994 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 PL+A+DQ Sbjct: 640 PLRALDQ 646>NP_001122401 Length = 1394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 PL+A+DQ Sbjct: 1249 PLRALDQ 1255>NP_002933 Length = 1378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PLQAVDQ 9 PL+A+DQ Sbjct: 1233 PLRALDQ 1239>NP_620711 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITPLQA 6 +TPLQA Sbjct: 258 VTPLQA 263>NP_006835 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LQAVDQ 9 LQAVDQ Sbjct: 160 LQAVDQ 165>NP_057396 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITPLQAV 7 +TPLQA+ Sbjct: 327 LTPLQAM 333>NP_006323 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TPLQAVD 8 +PLQA+D Sbjct: 27 SPLQALD 33>XP_005274596 Length = 1651 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TPLQAVDQ 9 TP+QA+ + Sbjct: 1624 TPMQAISE 1631>XP_005259774 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LQAVDQ 9 LQAVDQ Sbjct: 160 LQAVDQ 165>XP_005247007 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ITPLQA 6 +TPLQA Sbjct: 258 VTPLQA 263>NP_115991 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ITPLQAVDQ 9 I+PLQA +Q Sbjct: 280 ISPLQANNQ 288Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.131 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 553,767 Number of extensions: 713 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |