Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 18 1935 NP_066973 17 2528 NP_001171545 17 2528 XP_005268816 17 2528 XP_005268815 17 2528 XP_005268814 17 2528 XP_005268813 17 2528 XP_005268812 17 2528 XP_005268811 17 2528 NP_004930 17 4312 NP_000334 17 4312 NP_001243243 17 4312 NP_001073892 17 4312 NP_001001991 16 5631 NP_001269605 16 5631 NP_056245 16 5631 NP_001269604 16 5631 NP_003032 16 5631 NP_859070 16 5631 NP_061722 16 5631 NP_115649 16 5631 NP_001231664 16 5631 XP_006721136 16 5631 XP_006721135 16 5631 XP_005272295 16 5631 XP_005245884 16 5631 XP_005245882 16 5631 XP_006710614 16 5631 XP_005245881 16 5631 XP_005245880 16 5631 XP_006710613 16 5631 XP_005245879 16 5631 NP_114089 16 5631 NP_075573 16 7355 NP_075571 16 7355 NP_001269201 15 9605 NP_004665 15 9605 NP_001248761 15 9605 NP_001098684 15 9605 NP_001075224 15 9605 NP_001265844 15 9605 NP_000492 15 9605 NP_001265842 15 9605 NP_001265846 15 9605 NP_001265843 15 9605 NP_001265868 15 9605 NP_079095 15 9605 NP_001275584 15 9605 NP_001275583 15 9605 NP_001122103 15 9605 XP_005257745 15 9605 XP_006722156 15 9605 XP_006722155 15 9605 XP_006722154 15 9605 XP_006716476 15 9605 XP_006715941 15 9605 XP_006715939 15 9605 XP_006715937 15 9605 XP_005250245 15 9605 XP_005250244 15 9605 XP_005264617 15 9605 NP_001136155 15 9605>NP_002430 Length = 1137 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ITGGIAARS 9 IT GIAARS Sbjct: 1059 ITRGIAARS 1067>NP_066973 Length = 1076 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GGIAARS 9 GGIAARS Sbjct: 86 GGIAARS 92>NP_001171545 Length = 1061 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GGIAARS 9 GGIAARS Sbjct: 86 GGIAARS 92>XP_005268816 Length = 1062 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GGIAARS 9 GGIAARS Sbjct: 87 GGIAARS 93>XP_005268815 Length = 1077 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GGIAARS 9 GGIAARS Sbjct: 87 GGIAARS 93>XP_005268814 Length = 1102 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GGIAARS 9 GGIAARS Sbjct: 60 GGIAARS 66>XP_005268813 Length = 1114 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GGIAARS 9 GGIAARS Sbjct: 87 GGIAARS 93>XP_005268812 Length = 1128 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GGIAARS 9 GGIAARS Sbjct: 87 GGIAARS 93>XP_005268811 Length = 1129 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GGIAARS 9 GGIAARS Sbjct: 87 GGIAARS 93>NP_004930 Length = 740 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ITGGIAAR 8 I GG+AAR Sbjct: 323 IIGGVAAR 330>NP_000334 Length = 664 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 ITGG+AA Sbjct: 193 ITGGLAA 199>NP_001243243 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 ITGG+AA Sbjct: 66 ITGGLAA 72>NP_001073892 Length = 1140 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GGIAARS 9 GG+AARS Sbjct: 178 GGLAARS 184>NP_001001991 Length = 720 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TGGIAARS 9 TGGIAA S Sbjct: 665 TGGIAAVS 672>NP_001269605 Length = 609 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TGGIAARS 9 TGGIAA S Sbjct: 554 TGGIAAVS 561>NP_056245 Length = 737 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TGGIAARS 9 TGGIAA S Sbjct: 682 TGGIAAVS 689>NP_001269604 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TGGIAARS 9 TGGIAA S Sbjct: 625 TGGIAAVS 632>NP_003032 Length = 672 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGG+AA Sbjct: 190 VTGGLAA 196>NP_859070 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGG+AA Sbjct: 206 VTGGLAA 212>NP_061722 Length = 1007 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITGGIAARS 9 + GGI ARS Sbjct: 230 VDGGIPARS 238>NP_115649 Length = 195 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ITGGIAAR 8 + GG+AAR Sbjct: 125 VNGGLAAR 132>NP_001231664 Length = 125 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ITGGIAAR 8 + GG+AAR Sbjct: 55 VNGGLAAR 62>XP_006721136 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGG+AA Sbjct: 178 VTGGLAA 184>XP_006721135 Length = 698 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGG+AA Sbjct: 190 VTGGLAA 196>XP_005272295 Length = 961 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGGIAARS 9 TGG +ARS Sbjct: 120 TGGASARS 127>XP_005245884 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_005245882 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_006710614 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_005245881 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_005245880 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_006710613 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGG+AA Sbjct: 206 VTGGLAA 212>XP_005245879 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGG+AA Sbjct: 206 VTGGLAA 212>NP_114089 Length = 884 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITGGIAARS 9 + GGI ARS Sbjct: 230 VDGGIPARS 238>NP_075573 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ITGGIAAR 8 +TGG+A R Sbjct: 177 LTGGLAER 184>NP_075571 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ITGGIAAR 8 +TGG+A R Sbjct: 177 LTGGLAER 184>NP_001269201 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITGGIAARS 9 + GGIAA S Sbjct: 144 LNGGIAAGS 152>NP_004665 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITGGIAARS 9 + GGIAA S Sbjct: 283 LNGGIAAGS 291>NP_001248761 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITGGIAARS 9 + GGIAA S Sbjct: 189 LNGGIAAGS 197>NP_001098684 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITGGIAARS 9 + GGIAA S Sbjct: 189 LNGGIAAGS 197>NP_001075224 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 676 GGVAAR 681>NP_001265844 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 701 GGVAAR 706>NP_000492 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 695 GGVAAR 700>NP_001265842 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 614 GGVAAR 619>NP_001265846 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 685 GGVAAR 690>NP_001265843 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 671 GGVAAR 676>NP_001265868 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 757 GGVAAR 762>NP_079095 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGGIA+ Sbjct: 6 LTGGIAS 12>NP_001275584 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGGIA+ Sbjct: 6 LTGGIAS 12>NP_001275583 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGGIA+ Sbjct: 6 LTGGIAS 12>NP_001122103 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGGIA+ Sbjct: 6 LTGGIAS 12>XP_005257745 Length = 132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGGIA+ Sbjct: 6 LTGGIAS 12>XP_006722156 Length = 132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGGIA+ Sbjct: 6 LTGGIAS 12>XP_006722155 Length = 132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGGIA+ Sbjct: 6 LTGGIAS 12>XP_006722154 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ITGGIAA 7 +TGGIA+ Sbjct: 6 LTGGIAS 12>XP_006716476 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ITGGIAARS 9 + GGIAA S Sbjct: 283 LNGGIAAGS 291>XP_006715941 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 527 GGVAAR 532>XP_006715939 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 658 GGVAAR 663>XP_006715937 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 677 GGVAAR 682>XP_005250245 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 681 GGVAAR 686>XP_005250244 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GGIAAR 8 GG+AAR Sbjct: 683 GGVAAR 688>XP_005264617 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGGIAARS 9 TGG AAR+ Sbjct: 30 TGGPAARA 37>NP_001136155 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGGIAARS 9 TGG AAR+ Sbjct: 30 TGGPAARA 37Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.133 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 488,230 Number of extensions: 436 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |