Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 18 1482 NP_005913 18 1482 XP_005267046 18 1482 XP_005267045 18 1482 NP_056493 17 4312 XP_006719869 17 4312 XP_006719868 17 4312 XP_005266408 17 4312 XP_005266407 17 4312 XP_005266403 17 4312 XP_006719867 17 4312 XP_006719866 17 4312 XP_005266405 17 4312 XP_005266404 17 4312 NP_001274103 16 7355 NP_000343 16 7355 NP_004332 16 7355 NP_001106205 16 7355 NP_075559 16 7355 NP_001159484 16 7355 NP_001275640 16 7355 XP_006722435 16 7355 XP_005258240 16 7355 XP_006722434 16 7355 XP_006718349 16 7355 XP_005264615 16 7355 XP_006712164 16 7355 XP_005264614 16 7355 XP_005264613 16 7355 XP_005264612 16 7355 NP_001135389 16 7355 NP_110421 15 9605 NP_001139542 15 9605 NP_001139543 15 9605 NP_001269588 15 9605 NP_060414 15 9605 XP_005266617 15 9605 XP_005266615 15 9605 XP_005266614 15 9605 XP_005266613 15 9605 XP_005253054 15 9605>NP_006715 Length = 1558 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 ISVDT ELM Sbjct: 1311 ISVDTGELM 1319>NP_005913 Length = 1608 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 ISVDT ELM Sbjct: 1361 ISVDTGELM 1369>XP_005267046 Length = 1554 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 ISVDT ELM Sbjct: 1307 ISVDTGELM 1315>XP_005267045 Length = 1604 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 ISVDT ELM Sbjct: 1357 ISVDTGELM 1365>NP_056493 Length = 2946 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +S DTR+L+ Sbjct: 1020 VSTDTRDLL 1028>XP_006719869 Length = 2943 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +S DTR+L+ Sbjct: 1020 VSTDTRDLL 1028>XP_006719868 Length = 2938 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +S DTR+L+ Sbjct: 1020 VSTDTRDLL 1028>XP_005266408 Length = 1934 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +S DTR+L+ Sbjct: 1020 VSTDTRDLL 1028>XP_005266407 Length = 2641 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +S DTR+L+ Sbjct: 694 VSTDTRDLL 702>XP_005266403 Length = 2941 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +S DTR+L+ Sbjct: 1020 VSTDTRDLL 1028>XP_006719867 Length = 2961 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +S DTR+L+ Sbjct: 1020 VSTDTRDLL 1028>XP_006719866 Length = 2962 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +S DTR+L+ Sbjct: 1020 VSTDTRDLL 1028>XP_005266405 Length = 2964 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +S DTR+L+ Sbjct: 1020 VSTDTRDLL 1028>XP_005266404 Length = 2967 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +S DTR+L+ Sbjct: 1020 VSTDTRDLL 1028>NP_001274103 Length = 1582 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +++DT +LM Sbjct: 421 VAIDTNQLM 429>NP_000343 Length = 1581 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +++DT +LM Sbjct: 421 VAIDTNQLM 429>NP_004332 Length = 2225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VDTREL 8 VDTREL Sbjct: 119 VDTREL 124>NP_001106205 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVDTRE 7 SVDTRE Sbjct: 293 SVDTRE 298>NP_075559 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISVDTREL 8 +S+D REL Sbjct: 154 LSIDAREL 161>NP_001159484 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVDTRE 7 SVDTRE Sbjct: 293 SVDTRE 298>NP_001275640 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVDTRE 7 SVDTRE Sbjct: 106 SVDTRE 111>XP_006722435 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVDTRE 7 SVDTRE Sbjct: 150 SVDTRE 155>XP_005258240 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVDTRE 7 SVDTRE Sbjct: 293 SVDTRE 298>XP_006722434 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVDTRE 7 SVDTRE Sbjct: 293 SVDTRE 298>XP_006718349 Length = 1646 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 +++DT +LM Sbjct: 420 VAIDTNQLM 428>XP_005264615 Length = 2162 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VDTREL 8 VDTREL Sbjct: 119 VDTREL 124>XP_006712164 Length = 2179 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VDTREL 8 VDTREL Sbjct: 119 VDTREL 124>XP_005264614 Length = 2191 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VDTREL 8 VDTREL Sbjct: 119 VDTREL 124>XP_005264613 Length = 2208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VDTREL 8 VDTREL Sbjct: 119 VDTREL 124>XP_005264612 Length = 2242 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VDTREL 8 VDTREL Sbjct: 119 VDTREL 124>NP_001135389 Length = 1335 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ISVDTRELM 9 ISV TREL+ Sbjct: 574 ISVLTRELL 582>NP_110421 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISVDTREL 8 + VD+REL Sbjct: 102 VQVDSREL 109>NP_001139542 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISVDTREL 8 + VD+REL Sbjct: 195 VQVDSREL 202>NP_001139543 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISVDTREL 8 + VD+REL Sbjct: 102 VQVDSREL 109>NP_001269588 Length = 1355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVDTREL 8 SVD REL Sbjct: 900 SVDNREL 906>NP_060414 Length = 1287 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVDTREL 8 SVD REL Sbjct: 832 SVDNREL 838>XP_005266617 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISVDTREL 8 + VD+REL Sbjct: 102 VQVDSREL 109>XP_005266615 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISVDTREL 8 + VD+REL Sbjct: 195 VQVDSREL 202>XP_005266614 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISVDTREL 8 + VD+REL Sbjct: 195 VQVDSREL 202>XP_005266613 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISVDTREL 8 + VD+REL Sbjct: 195 VQVDSREL 202>XP_005253054 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVDTREL 8 SVD REL Sbjct: 920 SVDNREL 926Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.133 0.324 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 447,549 Number of extensions: 616 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |