Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 18 1135 NP_001208 17 3301 NP_001231118 16 5631 NP_001231121 16 5631 NP_055564 16 5631 NP_001231119 16 5631 NP_001231120 16 5631 NP_001231122 16 5631 NP_775808 16 5631 XP_006720406 16 5631 XP_006720405 16 5631 XP_006720404 16 5631 XP_006720403 16 5631 XP_006720402 16 5631 XP_006720401 16 5631 XP_006720400 16 5631 XP_006720399 16 5631 XP_005277669 16 5631 XP_005277638 16 5631 XP_005277637 16 5631 XP_005277636 16 5631 NP_001003795 16 5631 NP_001180394 16 7355 NP_001092757 16 7355 NP_002105 16 7355 NP_060225 16 7355 NP_001165763 16 7355 NP_005169 16 7355 NP_001010924 16 7355 XP_005257292 16 7355 XP_006725327 16 7355 XP_005259186 16 7355 XP_006721889 16 7355 NP_001180384 16 7355 NP_647598 15 9605 NP_647596 15 9605 NP_001157281 15 9605 NP_647597 15 9605 NP_079414 15 9605 NP_997245 15 9605 XP_006725317 15 9605 XP_005256511 15 9605 XP_005266602 15 9605 XP_005263984 15 9605 XP_005263983 15 9605 XP_005263982 15 9605 XP_005263981 15 9605 XP_005263980 15 9605 XP_006712493 15 9605 XP_006712491 15 9605 XP_006712489 15 9605>NP_005350 Length = 552 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 I VASTSQP Sbjct: 217 IPVASTSQP 225>NP_001208 Length = 328 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 ++VASTS P Sbjct: 188 VNVASTSNP 196>NP_001231118 Length = 1644 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 1021 VSVSETSEP 1029>NP_001231121 Length = 1504 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 924 VSVSETSEP 932>NP_055564 Length = 1472 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 892 VSVSETSEP 900>NP_001231119 Length = 1533 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 953 VSVSETSEP 961>NP_001231120 Length = 1463 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 883 VSVSETSEP 891>NP_001231122 Length = 1347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 828 VSVSETSEP 836>NP_775808 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 +SVAST P Sbjct: 614 VSVASTGTP 622>XP_006720406 Length = 1591 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 968 VSVSETSEP 976>XP_006720405 Length = 1347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 968 VSVSETSEP 976>XP_006720404 Length = 1477 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 968 VSVSETSEP 976>XP_006720403 Length = 1486 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 968 VSVSETSEP 976>XP_006720402 Length = 1487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 968 VSVSETSEP 976>XP_006720401 Length = 1504 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 968 VSVSETSEP 976>XP_006720400 Length = 1526 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 968 VSVSETSEP 976>XP_006720399 Length = 1548 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISVASTSQP 9 +SV+ TS+P Sbjct: 968 VSVSETSEP 976>XP_005277669 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 +SVAST P Sbjct: 614 VSVASTGTP 622>XP_005277638 Length = 755 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 +SVAST P Sbjct: 420 VSVASTGTP 428>XP_005277637 Length = 878 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 +SVAST P Sbjct: 543 VSVASTGTP 551>XP_005277636 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 +SVAST P Sbjct: 614 VSVASTGTP 622>NP_001003795 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 +SVAST P Sbjct: 614 VSVASTGTP 622>NP_001180394 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASTSQP 9 ASTSQP Sbjct: 844 ASTSQP 849>NP_001092757 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 I +ASTS P Sbjct: 447 IELASTSSP 455>NP_002105 Length = 2718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASTSQP 9 ASTSQP Sbjct: 2658 ASTSQP 2663>NP_060225 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVASTSQP 9 S AST QP Sbjct: 721 SAASTGQP 728>NP_001165763 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 I +ASTS P Sbjct: 428 IELASTSSP 436>NP_005169 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASTSQP 9 ASTSQP Sbjct: 366 ASTSQP 371>NP_001010924 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 IS AST QP Sbjct: 40 ISDASTHQP 48>XP_005257292 Length = 1041 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASTSQP 9 ASTSQP Sbjct: 781 ASTSQP 786>XP_006725327 Length = 1041 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASTSQP 9 ASTSQP Sbjct: 781 ASTSQP 786>XP_005259186 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASTSQP 9 ASTSQP Sbjct: 562 ASTSQP 567>XP_006721889 Length = 1041 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASTSQP 9 ASTSQP Sbjct: 781 ASTSQP 786>NP_001180384 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVASTSQP 9 S AST QP Sbjct: 686 SAASTGQP 693>NP_647598 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 ISV + SQP Sbjct: 339 ISVTTPSQP 347>NP_647596 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 ISV + SQP Sbjct: 354 ISVTTPSQP 362>NP_001157281 Length = 1941 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVASTSQP 9 SVAS S+P Sbjct: 693 SVASASRP 700>NP_647597 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 ISV + SQP Sbjct: 339 ISVTTPSQP 347>NP_079414 Length = 944 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVASTSQP 9 S ASTS P Sbjct: 413 SAASTSNP 420>NP_997245 Length = 962 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVASTSQP 9 S AST QP Sbjct: 934 SYASTDQP 941>XP_006725317 Length = 1745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVASTSQP 9 SVAS S+P Sbjct: 693 SVASASRP 700>XP_005256511 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVASTSQP 9 SVAS S+P Sbjct: 693 SVASASRP 700>XP_005266602 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVASTSQP 9 S ASTS P Sbjct: 391 SAASTSNP 398>XP_005263984 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVASTSQP 9 S AST QP Sbjct: 935 SYASTDQP 942>XP_005263983 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVASTSQP 9 S AST QP Sbjct: 935 SYASTDQP 942>XP_005263982 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVASTSQP 9 S AST QP Sbjct: 949 SYASTDQP 956>XP_005263981 Length = 990 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVASTSQP 9 S AST QP Sbjct: 962 SYASTDQP 969>XP_005263980 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVASTSQP 9 S AST QP Sbjct: 963 SYASTDQP 970>XP_006712493 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 ISV + SQP Sbjct: 370 ISVTTPSQP 378>XP_006712491 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 ISV + SQP Sbjct: 385 ISVTTPSQP 393>XP_006712489 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISVASTSQP 9 ISV + SQP Sbjct: 385 ISVTTPSQP 393Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.103 0.242 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 377,730 Number of extensions: 509 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |