Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 18 1482 XP_006713721 18 1482 NP_001139280 17 2528 NP_000623 17 2528 NP_056364 17 4312 XP_005267570 17 4312 XP_006720171 17 4312 XP_005267569 17 4312 XP_005267568 17 4312 XP_006720170 17 4312 XP_006720169 17 4312 NP_149418 16 7355 NP_056145 16 7355 NP_150231 16 7355 NP_150230 16 7355 NP_001647 16 7355 NP_001241661 16 7355 NP_001120859 16 7355 NP_001120861 16 7355 NP_036279 16 7355 NP_001170847 16 7355 NP_001120860 16 7355 NP_001120858 16 7355 NP_001138940 16 7355 NP_001157939 16 7355 XP_006726588 16 7355 XP_006726586 16 7355 XP_006726479 16 7355 XP_003960379 16 7355 XP_006718170 16 7355 XP_006718169 16 7355 XP_006718168 16 7355 XP_006718167 16 7355 XP_006718166 16 7355 XP_006718165 16 7355 XP_005248554 16 7355 XP_005264835 16 7355 XP_005276144 16 7355 XP_003846716 16 7355 NP_005306 16 7355 NP_001264985 16 7355 NP_001243618 15 9605 NP_001243614 15 9605 NP_055606 15 9605 NP_001243619 15 9605 NP_659419 15 9605>NP_006209 Length = 1068 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISTRDRLSE 9 ISTRD LSE Sbjct: 534 ISTRDPLSE 542>XP_006713721 Length = 1068 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISTRDRLSE 9 ISTRD LSE Sbjct: 534 ISTRDPLSE 542>NP_001139280 Length = 1153 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 STRDRLSE 9 STRDRL E Sbjct: 661 STRDRLRE 668>NP_000623 Length = 1152 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 STRDRLSE 9 STRDRL E Sbjct: 660 STRDRLRE 667>NP_056364 Length = 1163 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ISTRDRL 7 +STRDRL Sbjct: 653 LSTRDRL 659>XP_005267570 Length = 1219 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ISTRDRL 7 +STRDRL Sbjct: 709 LSTRDRL 715>XP_006720171 Length = 1240 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ISTRDRL 7 +STRDRL Sbjct: 730 LSTRDRL 736>XP_005267569 Length = 1340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ISTRDRL 7 +STRDRL Sbjct: 830 LSTRDRL 836>XP_005267568 Length = 1340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ISTRDRL 7 +STRDRL Sbjct: 830 LSTRDRL 836>XP_006720170 Length = 1354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ISTRDRL 7 +STRDRL Sbjct: 844 LSTRDRL 850>XP_006720169 Length = 1361 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ISTRDRL 7 +STRDRL Sbjct: 851 LSTRDRL 857>NP_149418 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>NP_056145 Length = 1117 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDRLSE 9 STR+RL E Sbjct: 121 STRERLRE 128>NP_150231 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDRLSE 9 S RDR+SE Sbjct: 482 SHRDRISE 489>NP_150230 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDRLSE 9 S RDR+SE Sbjct: 482 SHRDRISE 489>NP_001647 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDRLSE 9 S RDR+SE Sbjct: 482 SHRDRISE 489>NP_001241661 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDRLSE 9 STR+RL E Sbjct: 121 STRERLRE 128>NP_001120859 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>NP_001120861 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>NP_036279 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>NP_001170847 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>NP_001120860 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>NP_001120858 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>NP_001138940 Length = 1117 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDRLSE 9 STR+RL E Sbjct: 121 STRERLRE 128>NP_001157939 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>XP_006726588 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>XP_006726586 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>XP_006726479 Length = 401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 21 IATRERLAQ 29>XP_003960379 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>XP_006718170 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>XP_006718169 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>XP_006718168 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>XP_006718167 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>XP_006718166 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>XP_006718165 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>XP_005248554 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STRDRLSE 9 S RDR+SE Sbjct: 306 SHRDRISE 313>XP_005264835 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 70 IATRERLAQ 78>XP_005276144 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 55 IATRERLAQ 63>XP_003846716 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>NP_005306 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ISTRDRLS 8 +STR+RL+ Sbjct: 153 VSTRERLA 160>NP_001264985 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ISTRDRLSE 9 I+TR+RL++ Sbjct: 46 IATRERLAQ 54>NP_001243618 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISTRDRLSE 9 I ++DRLSE Sbjct: 66 IISQDRLSE 74>NP_001243614 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISTRDRLSE 9 I ++DRLSE Sbjct: 98 IISQDRLSE 106>NP_055606 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISTRDRLSE 9 I ++DRLSE Sbjct: 98 IISQDRLSE 106>NP_001243619 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISTRDRLSE 9 I ++DRLSE Sbjct: 27 IISQDRLSE 35>NP_659419 Length = 1989 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ISTRDRLSE 9 IST D LSE Sbjct: 351 ISTSDILSE 359Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.125 0.299 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 385,351 Number of extensions: 552 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |