Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 18 1482 NP_434701 17 4312 NP_434700 17 4312 NP_060224 17 4312 XP_005249256 17 4312 XP_006715189 17 4312 XP_006715188 17 4312 NP_001191800 16 5631 NP_004818 16 7355 NP_001244315 16 7355 NP_001025046 16 7355 NP_079143 16 7355 NP_001157968 16 7355 XP_005248559 16 7355 XP_006714677 16 7355 XP_006714564 16 7355 XP_006714563 16 7355 XP_005248434 16 7355 XP_005248433 16 7355 XP_005263413 16 7355 XP_005263412 16 7355 XP_005263411 16 7355 XP_005247674 16 7355 XP_006713762 16 7355 XP_006713761 16 7355 XP_006713760 16 7355 XP_006713759 16 7355 NP_001276976 15 9605 NP_002843 15 9605 NP_001276975 15 9605 NP_065852 15 9605 NP_057287 15 9605 NP_055796 15 9605 NP_077747 15 9605 NP_001035723 15 9605 XP_006724141 15 9605 XP_006719294 15 9605 XP_005250066 15 9605 XP_005250064 15 9605 XP_005250063 15 9605 XP_005250062 15 9605 XP_005250061 15 9605 XP_006716084 15 9605 XP_005250060 15 9605 XP_005250059 15 9605 NP_001138947 15 9605 NP_116037 15 9605>NP_004351 Length = 882 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISTRAELHR 9 ISTRAEL R Sbjct: 542 ISTRAELDR 550>NP_434701 Length = 492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISTRAELH 8 I+TR ELH Sbjct: 361 IATREELH 368>NP_434700 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISTRAELH 8 I+TR ELH Sbjct: 361 IATREELH 368>NP_060224 Length = 1440 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAELHR Sbjct: 599 RAELHR 604>XP_005249256 Length = 1054 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAELHR Sbjct: 213 RAELHR 218>XP_006715189 Length = 1240 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAELHR Sbjct: 599 RAELHR 604>XP_006715188 Length = 1400 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAELHR Sbjct: 599 RAELHR 604>NP_001191800 Length = 110 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TRAELHR 9 TRA LHR Sbjct: 102 TRAALHR 108>NP_004818 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRAELHR 9 T+AELH+ Sbjct: 345 TKAELHQ 351>NP_001244315 Length = 611 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRAELHR 9 T+AELH+ Sbjct: 345 TKAELHQ 351>NP_001025046 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRAELHR 9 S RAE+H+ Sbjct: 83 SLRAEMHK 90>NP_079143 Length = 1822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRAELHR 9 T+AELH+ Sbjct: 1101 TKAELHQ 1107>NP_001157968 Length = 1854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 987 RAEMHR 992>XP_005248559 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRAELHR 9 S RAE+H+ Sbjct: 83 SLRAEMHK 90>XP_006714677 Length = 204 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STRAELHR 9 S RAE+H+ Sbjct: 83 SLRAEMHK 90>XP_006714564 Length = 1537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRAELHR 9 T+AELH+ Sbjct: 1101 TKAELHQ 1107>XP_006714563 Length = 1766 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRAELHR 9 T+AELH+ Sbjct: 1044 TKAELHQ 1050>XP_005248434 Length = 1818 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRAELHR 9 T+AELH+ Sbjct: 1096 TKAELHQ 1102>XP_005248433 Length = 1823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRAELHR 9 T+AELH+ Sbjct: 1101 TKAELHQ 1107>XP_005263413 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRAELHR 9 T+AELH+ Sbjct: 343 TKAELHQ 349>XP_005263412 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRAELHR 9 T+AELH+ Sbjct: 345 TKAELHQ 351>XP_005263411 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TRAELHR 9 T+AELH+ Sbjct: 345 TKAELHQ 351>XP_005247674 Length = 1089 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 222 RAEMHR 227>XP_006713762 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 1031 RAEMHR 1036>XP_006713761 Length = 1554 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 687 RAEMHR 692>XP_006713760 Length = 1847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 980 RAEMHR 985>XP_006713759 Length = 1898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 1031 RAEMHR 1036>NP_001276976 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRAELH 8 T+AELH Sbjct: 297 TKAELH 302>NP_002843 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRAELH 8 TRA+LH Sbjct: 159 TRADLH 164>NP_001276975 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRAELH 8 T+AELH Sbjct: 134 TKAELH 139>NP_065852 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 +AELHR Sbjct: 139 KAELHR 144>NP_057287 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 526 RAEVHR 531>NP_055796 Length = 1946 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 +AELHR Sbjct: 1366 KAELHR 1371>NP_077747 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 285 RAEVHR 290>NP_001035723 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 482 RAEVHR 487>XP_006724141 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TRAELH 8 T+AELH Sbjct: 259 TKAELH 264>XP_006719294 Length = 2348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RA+LHR Sbjct: 56 RAQLHR 61>XP_005250066 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 265 RAEVHR 270>XP_005250064 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 401 RAEVHR 406>XP_005250063 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 402 RAEVHR 407>XP_005250062 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 525 RAEVHR 530>XP_005250061 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 482 RAEVHR 487>XP_006716084 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 522 RAEVHR 527>XP_005250060 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 525 RAEVHR 530>XP_005250059 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RAE+HR Sbjct: 526 RAEVHR 531>NP_001138947 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RA+LHR Sbjct: 56 RAQLHR 61>NP_116037 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RAELHR 9 RA+LHR Sbjct: 105 RAQLHR 110Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.128 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 470,839 Number of extensions: 569 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |