Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 665 XP_005262424 19 665 NP_001243372 17 4312 NP_001243371 17 4312 NP_660282 17 4312 NP_001124320 17 4312 NP_004901 17 4312 XP_006721069 17 4312 NP_006826 16 5631 NP_001243125 16 5631 NP_001645 16 5631 NP_001438 16 5631 XP_006724592 16 5631 XP_006714824 16 5631 NP_659422 16 5631 NP_071923 16 5631 NP_055918 16 7355 NP_001363 16 7355 XP_006721528 16 7355 NP_004653 16 7355 NP_002871 15 9605 NP_878908 15 9605 NP_001035089 15 9605 NP_001398 15 9605 NP_001138295 15 9605 NP_005839 15 9605 NP_001193937 15 9605 NP_055969 15 9605 NP_005413 15 9605 XP_006726924 15 9605 XP_005254179 15 9605 XP_005254178 15 9605 XP_006720435 15 9605 XP_005254177 15 9605 XP_006720434 15 9605 XP_005254176 15 9605 XP_005271710 15 9605 XP_006715557 15 9605 XP_006715556 15 9605 XP_006715555 15 9605 XP_006715554 15 9605 XP_006715553 15 9605 XP_006715552 15 9605 XP_005267054 15 9605 XP_005267053 15 9605 XP_006715551 15 9605 XP_006715550 15 9605 XP_006715549 15 9605 XP_006715548 15 9605 XP_006715547 15 9605 XP_006715546 15 9605 XP_005265417 15 9605 XP_005265416 15 9605 XP_005265415 15 9605 XP_005265414 15 9605 XP_005265412 15 9605 NP_061755 15 9605>NP_722576 Length = 3080 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ISTAAPVD 8 ISTAAPVD Sbjct: 474 ISTAAPVD 481>XP_005262424 Length = 2875 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ISTAAPVD 8 ISTAAPVD Sbjct: 269 ISTAAPVD 276>NP_001243372 Length = 299 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 STAAPVD 8 +TAAPVD Sbjct: 54 TTAAPVD 60>NP_001243371 Length = 394 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 STAAPVD 8 +TAAPVD Sbjct: 54 TTAAPVD 60>NP_660282 Length = 340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 STAAPVD 8 +TAAPVD Sbjct: 54 TTAAPVD 60>NP_001124320 Length = 1243 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AAPVDF 9 AAPVDF Sbjct: 1194 AAPVDF 1199>NP_004901 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AAPVDF 9 AAPVDF Sbjct: 1195 AAPVDF 1200>XP_006721069 Length = 340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 STAAPVD 8 +TAAPVD Sbjct: 54 TTAAPVD 60>NP_006826 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ISTAAPVDF 9 + TA P+DF Sbjct: 142 LHTATPLDF 150>NP_001243125 Length = 609 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 +ST AP+D Sbjct: 224 VSTTAPMD 231>NP_001645 Length = 606 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 +ST AP+D Sbjct: 221 VSTTAPMD 228>NP_001438 Length = 4349 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISTAAPVDF 9 IST+ P+D+ Sbjct: 514 ISTSKPMDY 522>XP_006724592 Length = 611 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 +ST AP+D Sbjct: 226 VSTTAPMD 233>XP_006714824 Length = 4349 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISTAAPVDF 9 IST+ P+D+ Sbjct: 514 ISTSKPMDY 522>NP_659422 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 I TAAP+D Sbjct: 431 IHTAAPLD 438>NP_071923 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 I TAAP+D Sbjct: 431 IHTAAPLD 438>NP_055918 Length = 1925 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STAAPVDF 9 + +APVDF Sbjct: 1132 NASAPVDF 1139>NP_001363 Length = 4486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAAPVDF 9 TA+PV+F Sbjct: 3786 TASPVEF 3792>XP_006721528 Length = 3869 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAAPVDF 9 TA+PV+F Sbjct: 3786 TASPVEF 3792>NP_004653 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAAPVDF 9 TA+PV+F Sbjct: 98 TASPVEF 104>NP_002871 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ISTAAPVD 8 +ST PVD Sbjct: 266 VSTTLPVD 273>NP_878908 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 STAAPV 7 STAAPV Sbjct: 326 STAAPV 331>NP_001035089 Length = 1651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 268 LSTTDPADF 276>NP_001398 Length = 3312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 I AP+DF Sbjct: 602 IQVVAPLDF 610>NP_001138295 Length = 1906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 IST+ P+D Sbjct: 1631 ISTSGPLD 1638>NP_005839 Length = 1863 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 IST+ P+D Sbjct: 1588 ISTSGPLD 1595>NP_001193937 Length = 1743 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 267 LSTTDPADF 275>NP_055969 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AAPVDF 9 +APVDF Sbjct: 88 SAPVDF 93>NP_005413 Length = 2155 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 ISTA DF Sbjct: 425 ISTAVETDF 433>XP_006726924 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 STAAPV 7 STAAPV Sbjct: 312 STAAPV 317>XP_005254179 Length = 1173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 IST+ P+D Sbjct: 898 ISTSGPLD 905>XP_005254178 Length = 1863 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 IST+ P+D Sbjct: 1588 ISTSGPLD 1595>XP_006720435 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 IST+ P+D Sbjct: 1632 ISTSGPLD 1639>XP_005254177 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 IST+ P+D Sbjct: 1632 ISTSGPLD 1639>XP_006720434 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 IST+ P+D Sbjct: 1632 ISTSGPLD 1639>XP_005254176 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISTAAPVD 8 IST+ P+D Sbjct: 1632 ISTSGPLD 1639>XP_005271710 Length = 2150 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 ISTA DF Sbjct: 425 ISTAVETDF 433>XP_006715557 Length = 1744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 267 LSTTDPADF 275>XP_006715556 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 269 LSTTDPADF 277>XP_006715555 Length = 1638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 269 LSTTDPADF 277>XP_006715554 Length = 1768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 269 LSTTDPADF 277>XP_006715553 Length = 1808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 267 LSTTDPADF 275>XP_006715552 Length = 1817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 269 LSTTDPADF 277>XP_005267054 Length = 1823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 269 LSTTDPADF 277>XP_005267053 Length = 1824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 268 LSTTDPADF 276>XP_006715551 Length = 1825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 269 LSTTDPADF 277>XP_006715550 Length = 1830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 269 LSTTDPADF 277>XP_006715549 Length = 1830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 267 LSTTDPADF 275>XP_006715548 Length = 1831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 268 LSTTDPADF 276>XP_006715547 Length = 1831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 268 LSTTDPADF 276>XP_006715546 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ISTAAPVDF 9 +ST P DF Sbjct: 269 LSTTDPADF 277>XP_005265417 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ISTAAPVD 8 +ST PVD Sbjct: 266 VSTTLPVD 273>XP_005265416 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ISTAAPVD 8 +ST PVD Sbjct: 152 VSTTLPVD 159>XP_005265415 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ISTAAPVD 8 +ST PVD Sbjct: 185 VSTTLPVD 192>XP_005265414 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ISTAAPVD 8 +ST PVD Sbjct: 233 VSTTLPVD 240>XP_005265412 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ISTAAPVD 8 +ST PVD Sbjct: 266 VSTTLPVD 273>NP_061755 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ISTAAPVDF 9 I+ AP+DF Sbjct: 301 ITLTAPLDF 309Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.131 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 555,495 Number of extensions: 762 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |