Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 19 869 NP_001120972 19 869 XP_006716054 19 869 XP_006716053 19 869 XP_006716052 19 869 XP_006716051 19 869 NP_001157915 17 4312 NP_057664 16 5631 NP_036516 16 7355 NP_653267 16 7355 NP_005877 16 7355 NP_079130 16 7355 NP_001136336 16 7355 XP_006723839 16 7355 XP_005260259 16 7355 XP_006721417 16 7355 XP_006721416 16 7355 XP_006721186 16 7355 XP_005255829 16 7355 XP_006721185 16 7355 XP_006721184 16 7355 XP_006719216 16 7355 NP_001139669 16 7355 NP_775082 15 9605 NP_003377 15 9605 NP_006786 15 9605 NP_001269373 15 9605 NP_976224 15 9605 NP_443132 15 9605 NP_937757 15 9605 NP_937756 15 9605 NP_872393 15 9605 NP_001269374 15 9605 XP_005254432 15 9605 XP_006720566 15 9605 XP_006718487 15 9605 XP_006712515 15 9605 XP_006712514 15 9605 XP_006712513 15 9605 XP_006712512 15 9605 XP_006712511 15 9605 XP_006712510 15 9605 XP_006712509 15 9605 XP_005246533 15 9605 XP_006712508 15 9605 NP_115893 15 9605>NP_000236 Length = 1390 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ISSTVLGKL 9 ISSTVLGK+ Sbjct: 915 ISSTVLGKV 923>NP_001120972 Length = 1408 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ISSTVLGKL 9 ISSTVLGK+ Sbjct: 933 ISSTVLGKV 941>XP_006716054 Length = 960 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ISSTVLGKL 9 ISSTVLGK+ Sbjct: 485 ISSTVLGKV 493>XP_006716053 Length = 960 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ISSTVLGKL 9 ISSTVLGK+ Sbjct: 485 ISSTVLGKV 493>XP_006716052 Length = 1409 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ISSTVLGKL 9 ISSTVLGK+ Sbjct: 934 ISSTVLGKV 942>XP_006716051 Length = 1427 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ISSTVLGKL 9 ISSTVLGK+ Sbjct: 952 ISSTVLGKV 960>NP_001157915 Length = 1873 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISSTVLGKL 9 +SS V+GKL Sbjct: 1577 VSSPVIGKL 1585>NP_057664 Length = 1184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSTVLGKL 9 S TV+GKL Sbjct: 42 SGTVIGKL 49>NP_036516 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISSTVLGK 8 + STVLGK Sbjct: 405 LPSTVLGK 412>NP_653267 Length = 4753 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ISSTVLG 7 +SSTVLG Sbjct: 4019 LSSTVLG 4025>NP_005877 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISSTVLGK 8 +SS VLGK Sbjct: 23 VSSLVLGK 30>NP_079130 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTVLGK 8 SST+LGK Sbjct: 69 SSTMLGK 75>NP_001136336 Length = 2521 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISSTVLGKL 9 + TVLGKL Sbjct: 2023 LRKTVLGKL 2031>XP_006723839 Length = 452 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISSTVLGK 8 + STVLGK Sbjct: 327 LPSTVLGK 334>XP_005260259 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISSTVLGK 8 + STVLGK Sbjct: 405 LPSTVLGK 412>XP_006721417 Length = 2497 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISSTVLGKL 9 + TVLGKL Sbjct: 1999 LRKTVLGKL 2007>XP_006721416 Length = 2504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISSTVLGKL 9 + TVLGKL Sbjct: 2006 LRKTVLGKL 2014>XP_006721186 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISSTVLGK 8 +SS VLGK Sbjct: 23 VSSLVLGK 30>XP_005255829 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISSTVLGK 8 +SS VLGK Sbjct: 23 VSSLVLGK 30>XP_006721185 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISSTVLGK 8 +SS VLGK Sbjct: 23 VSSLVLGK 30>XP_006721184 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISSTVLGK 8 +SS VLGK Sbjct: 23 VSSLVLGK 30>XP_006719216 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSTVLGK 8 SST+LGK Sbjct: 69 SSTMLGK 75>NP_001139669 Length = 7081 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ISSTVLGK 8 ISS VLGK Sbjct: 3063 ISSHVLGK 3070>NP_775082 Length = 2721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISSTVLGKL 9 +SST GKL Sbjct: 1279 VSSTYSGKL 1287>NP_003377 Length = 2812 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISSTVLGKL 9 +SST GKL Sbjct: 1279 VSSTYSGKL 1287>NP_006786 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISSTVLGKL 9 + +TVLGK+ Sbjct: 476 LPNTVLGKI 484>NP_001269373 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISSTVLGKL 9 + +TVLGK+ Sbjct: 476 LPNTVLGKI 484>NP_976224 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STVLGK 8 STVLGK Sbjct: 247 STVLGK 252>NP_443132 Length = 3538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTVLGKL 9 +STV+G+L Sbjct: 2070 TSTVIGRL 2077>NP_937757 Length = 3667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTVLGKL 9 +STV+G+L Sbjct: 2134 TSTVIGRL 2141>NP_937756 Length = 3707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SSTVLGKL 9 +STV+G+L Sbjct: 2174 TSTVIGRL 2181>NP_872393 Length = 3234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STVLGKL 9 +T+LGKL Sbjct: 514 TTILGKL 520>NP_001269374 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISSTVLGKL 9 + +TVLGK+ Sbjct: 490 LPNTVLGKI 498>XP_005254432 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STVLGK 8 STVLGK Sbjct: 64 STVLGK 69>XP_006720566 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STVLGK 8 STVLGK Sbjct: 247 STVLGK 252>XP_006718487 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISSTVLGKL 9 + +TVLGK+ Sbjct: 476 LPNTVLGKI 484>XP_006712515 Length = 3232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STVLGKL 9 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712514 Length = 2496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STVLGKL 9 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712513 Length = 3220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STVLGKL 9 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712512 Length = 3237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STVLGKL 9 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712511 Length = 3256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STVLGKL 9 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712510 Length = 3305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STVLGKL 9 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712509 Length = 3319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STVLGKL 9 +T+LGKL Sbjct: 514 TTILGKL 520>XP_005246533 Length = 3323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STVLGKL 9 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712508 Length = 3324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STVLGKL 9 +T+LGKL Sbjct: 514 TTILGKL 520>NP_115893 Length = 3258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 STVLGKL 9 +T+LGKL Sbjct: 514 TTILGKL 520Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.131 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 384,530 Number of extensions: 467 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |