Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057613 17 3301 XP_006719899 17 3301 XP_006719898 17 3301 XP_006719897 17 3301 XP_006719895 17 3301 XP_005266476 17 3301 NP_005553 17 4312 NP_061486 17 4312 XP_006711379 17 4312 XP_005245207 17 4312 NP_001269488 16 7355 NP_009003 16 7355 NP_001269485 16 7355 NP_001269486 16 7355 NP_001269487 16 7355 XP_005247137 16 7355 NP_000205 15 9605 NP_004095 15 9605 NP_478066 15 9605 NP_003449 15 9605 XP_006724087 15 9605 XP_006713443 15 9605>NP_057613 Length = 1188 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ISSAEYSIL 9 IS+A+YS+L Sbjct: 73 ISTAKYSVL 81>XP_006719899 Length = 677 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ISSAEYSIL 9 IS+A+YS+L Sbjct: 33 ISTAKYSVL 41>XP_006719898 Length = 763 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ISSAEYSIL 9 IS+A+YS+L Sbjct: 33 ISTAKYSVL 41>XP_006719897 Length = 1148 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ISSAEYSIL 9 IS+A+YS+L Sbjct: 33 ISTAKYSVL 41>XP_006719895 Length = 1082 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ISSAEYSIL 9 IS+A+YS+L Sbjct: 33 ISTAKYSVL 41>XP_005266476 Length = 1148 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ISSAEYSIL 9 IS+A+YS+L Sbjct: 33 ISTAKYSVL 41>NP_005553 Length = 1193 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSAEYSI 8 SSAEYS+ Sbjct: 198 SSAEYSV 204>NP_061486 Length = 1111 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSAEYSI 8 SSAEYS+ Sbjct: 198 SSAEYSV 204>XP_006711379 Length = 1208 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSAEYSI 8 SSAEYS+ Sbjct: 261 SSAEYSV 267>XP_005245207 Length = 1256 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSAEYSI 8 SSAEYS+ Sbjct: 261 SSAEYSV 267>NP_001269488 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISSAEYSIL 9 ISS EY++L Sbjct: 255 ISSDEYTLL 263>NP_009003 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISSAEYSIL 9 ISS EY++L Sbjct: 319 ISSDEYTLL 327>NP_001269485 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISSAEYSIL 9 ISS EY++L Sbjct: 319 ISSDEYTLL 327>NP_001269486 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISSAEYSIL 9 ISS EY++L Sbjct: 319 ISSDEYTLL 327>NP_001269487 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISSAEYSIL 9 ISS EY++L Sbjct: 319 ISSDEYTLL 327>XP_005247137 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISSAEYSIL 9 ISS EY++L Sbjct: 319 ISSDEYTLL 327>NP_000205 Length = 1218 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SAEYSI 8 SAEYSI Sbjct: 993 SAEYSI 998>NP_004095 Length = 2511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SSAEYSI 8 SSAEY++ Sbjct: 730 SSAEYNV 736>NP_478066 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISSAEYSI 8 +SSA YSI Sbjct: 37 LSSAAYSI 44>NP_003449 Length = 3926 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSAEYS 7 SSAEYS Sbjct: 3701 SSAEYS 3706>XP_006724087 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISSAEYSI 8 +SSA YSI Sbjct: 37 LSSAAYSI 44>XP_006713443 Length = 3970 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSAEYS 7 SSAEYS Sbjct: 3745 SSAEYS 3750Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.122 0.277 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 388,950 Number of extensions: 1382 Number of successful extensions: 22 Number of sequences better than 10000.0: 22 Number of HSP's gapped: 22 Number of HSP's successfully gapped: 22 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |