Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003961 17 2528 XP_006716300 17 2528 NP_001138923 17 3301 NP_055621 16 5631 NP_001129471 16 5631 NP_003387 16 5631 XP_006725694 16 5631 XP_005257694 16 5631 NP_000029 16 7355 NP_001120983 16 7355 NP_001120982 16 7355 NP_001040625 16 7355 NP_005854 16 7355 NP_849157 16 7355 NP_059129 16 7355 XP_006714159 16 7355 XP_006714158 16 7355 XP_006714157 16 7355 NP_001229695 15 9605 NP_004737 15 9605 NP_001003809 15 9605 NP_001229693 15 9605 NP_001132914 15 9605 NP_919228 15 9605 NP_001229690 15 9605 NP_055486 15 9605 NP_001229692 15 9605 NP_001229691 15 9605 NP_001229694 15 9605 NP_006461 15 9605 XP_005258233 15 9605 XP_005258232 15 9605 XP_005258231 15 9605 XP_006722430 15 9605 XP_005258230 15 9605 XP_005258229 15 9605 XP_005258228 15 9605 XP_006716845 15 9605 XP_005251541 15 9605 XP_006716843 15 9605 XP_005251540 15 9605 XP_005249622 15 9605 XP_005249621 15 9605 NP_066553 15 9605>NP_003961 Length = 1465 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PFRSVGV 9 PFRSVG+ Sbjct: 255 PFRSVGL 261>XP_006716300 Length = 1445 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PFRSVGV 9 PFRSVG+ Sbjct: 255 PFRSVGL 261>NP_001138923 Length = 870 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 SPFRS+ + Sbjct: 140 SPFRSINI 147>NP_055621 Length = 1516 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SPFRSVG 8 SP RSVG Sbjct: 781 SPIRSVG 787>NP_001129471 Length = 1516 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SPFRSVG 8 SP RSVG Sbjct: 781 SPIRSVG 787>NP_003387 Length = 357 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ISPFRSVG 8 +SPFR G Sbjct: 228 LSPFRETG 235>XP_006725694 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ISPFRSVG 8 +SPFR G Sbjct: 228 LSPFRETG 235>XP_005257694 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ISPFRSVG 8 +SPFR G Sbjct: 228 LSPFRETG 235>NP_000029 Length = 2843 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISPFRSVG 8 +SP+RS G Sbjct: 1099 VSPYRSRG 1106>NP_001120983 Length = 2825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISPFRSVG 8 +SP+RS G Sbjct: 1081 VSPYRSRG 1088>NP_001120982 Length = 2843 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISPFRSVG 8 +SP+RS G Sbjct: 1099 VSPYRSRG 1106>NP_001040625 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISPFRSVG 8 I+PF+S G Sbjct: 500 IAPFQSAG 507>NP_005854 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISPFRSVG 8 I+PF+S G Sbjct: 446 IAPFQSAG 453>NP_849157 Length = 1077 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISPFRSVG 8 ISP R+VG Sbjct: 688 ISPSRNVG 695>NP_059129 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ISPFRSVGV 9 ++PF+S+G+ Sbjct: 378 LNPFQSLGL 386>XP_006714159 Length = 1077 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISPFRSVG 8 ISP R+VG Sbjct: 688 ISPSRNVG 695>XP_006714158 Length = 1077 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISPFRSVG 8 ISP R+VG Sbjct: 688 ISPSRNVG 695>XP_006714157 Length = 1077 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISPFRSVG 8 ISP R+VG Sbjct: 688 ISPSRNVG 695>NP_001229695 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 380 SKFQSVGV 387>NP_004737 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 672 SKFQSVGV 679>NP_001003809 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 370 SKFQSVGV 377>NP_001229693 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 378 SKFQSVGV 385>NP_001132914 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 SP RS+G+ Sbjct: 16 SPMRSLGL 23>NP_919228 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 SP RS+G+ Sbjct: 16 SPMRSLGL 23>NP_001229690 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 672 SKFQSVGV 679>NP_055486 Length = 1083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISPFRSVGV 9 I+ F+S+GV Sbjct: 573 ITAFQSIGV 581>NP_001229692 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 394 SKFQSVGV 401>NP_001229691 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 356 SKFQSVGV 363>NP_001229694 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 370 SKFQSVGV 377>NP_006461 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PFRSVGV 9 PFR +GV Sbjct: 491 PFRRLGV 497>XP_005258233 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 367 SKFQSVGV 374>XP_005258232 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 388 SKFQSVGV 395>XP_005258231 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 390 SKFQSVGV 397>XP_006722430 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 426 SKFQSVGV 433>XP_005258230 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 432 SKFQSVGV 439>XP_005258229 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 682 SKFQSVGV 689>XP_005258228 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SPFRSVGV 9 S F+SVGV Sbjct: 682 SKFQSVGV 689>XP_006716845 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ISPFRS 6 +SPFRS Sbjct: 185 LSPFRS 190>XP_005251541 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ISPFRS 6 +SPFRS Sbjct: 185 LSPFRS 190>XP_006716843 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ISPFRS 6 +SPFRS Sbjct: 185 LSPFRS 190>XP_005251540 Length = 934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ISPFRS 6 +SPFRS Sbjct: 185 LSPFRS 190>XP_005249622 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISPFRSVGV 9 I+ F+S+GV Sbjct: 573 ITAFQSIGV 581>XP_005249621 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISPFRSVGV 9 I+ F+S+GV Sbjct: 548 ITAFQSIGV 556>NP_066553 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ISPFRSVG 8 +SPFR G Sbjct: 129 LSPFRKQG 136Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.145 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 609,781 Number of extensions: 851 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |