Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 390 NP_001035957 20 390 XP_006721991 20 390 XP_006721990 20 390 XP_006721989 20 390 XP_005258041 20 390 XP_006721988 20 390 XP_006721987 20 390 XP_006721986 20 390 XP_005258040 20 390 XP_006721985 20 390 NP_001153239 18 1935 NP_054757 18 1935 XP_006715771 18 1935 XP_006715770 18 1935 XP_006715769 18 1935 NP_689472 17 3301 NP_001193997 17 3301 NP_055485 17 3301 NP_001193998 17 3301 NP_001193996 17 3301 NP_001277114 16 5631 NP_001231639 16 5631 NP_002047 16 5631 NP_068375 16 5631 NP_001263407 16 5631 NP_004959 16 5631 NP_001129492 16 5631 NP_071682 16 5631 NP_898898 16 5631 NP_778238 16 5631 XP_006715783 16 5631 XP_005249793 16 5631 XP_005249792 16 5631 XP_006715782 16 5631 XP_006715781 16 5631 XP_006715780 16 5631 XP_005262777 16 5631 XP_005262774 16 5631 NP_006840 16 5631 NP_004084 16 7355 NP_001034 16 7355 NP_002431 16 7355 NP_002106 16 7355 NP_001165972 16 7355 NP_001165973 16 7355 NP_056052 16 7355 NP_005101 16 7355 NP_001074003 16 7355 NP_001165975 16 7355 XP_006721326 16 7355 XP_005254452 16 7355 XP_005254451 16 7355 XP_006715005 16 7355 NP_777557 16 7355 NP_001020332 15 9605 NP_000097 15 9605 NP_000431 15 9605 NP_006436 15 9605 NP_001860 15 9605 NP_997077 15 9605 NP_001269360 15 9605 XP_006726383 15 9605 XP_005278414 15 9605 XP_006726380 15 9605 XP_005278411 15 9605 XP_006724220 15 9605 XP_005269367 15 9605 NP_689912 15 9605 NP_001812 15 9605 NP_005728 15 9605>NP_000258 Length = 2818 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ISKF DSQG Sbjct: 941 ISKFFDSQG 949>NP_001035957 Length = 2839 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ISKF DSQG Sbjct: 941 ISKFFDSQG 949>XP_006721991 Length = 1632 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ISKF DSQG Sbjct: 951 ISKFFDSQG 959>XP_006721990 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ISKF DSQG Sbjct: 951 ISKFFDSQG 959>XP_006721989 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ISKF DSQG Sbjct: 951 ISKFFDSQG 959>XP_005258041 Length = 2836 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ISKF DSQG Sbjct: 941 ISKFFDSQG 949>XP_006721988 Length = 2846 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ISKF DSQG Sbjct: 951 ISKFFDSQG 959>XP_006721987 Length = 2849 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ISKF DSQG Sbjct: 951 ISKFFDSQG 959>XP_006721986 Length = 2854 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ISKF DSQG Sbjct: 938 ISKFFDSQG 946>XP_005258040 Length = 2857 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ISKF DSQG Sbjct: 941 ISKFFDSQG 949>XP_006721985 Length = 2867 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ISKF DSQG Sbjct: 951 ISKFFDSQG 959>NP_001153239 Length = 419 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ++KFLDS G Sbjct: 48 VAKFLDSTG 56>NP_054757 Length = 419 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ++KFLDS G Sbjct: 48 VAKFLDSTG 56>XP_006715771 Length = 419 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ++KFLDS G Sbjct: 48 VAKFLDSTG 56>XP_006715770 Length = 419 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ++KFLDS G Sbjct: 48 VAKFLDSTG 56>XP_006715769 Length = 419 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ++KFLDS G Sbjct: 48 VAKFLDSTG 56>NP_689472 Length = 1910 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KFLDSQG 9 KF DSQG Sbjct: 48 KFFDSQG 54>NP_001193997 Length = 451 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ++KFLD+ G Sbjct: 82 VAKFLDASG 90>NP_055485 Length = 353 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ++KFLD+ G Sbjct: 50 VAKFLDASG 58>NP_001193998 Length = 423 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ++KFLD+ G Sbjct: 54 VAKFLDASG 62>NP_001193996 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ++KFLD+ G Sbjct: 50 VAKFLDASG 58>NP_001277114 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISKFLDSQ 8 I KFLD+Q Sbjct: 414 IRKFLDAQ 421>NP_001231639 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 + KFL+S+G Sbjct: 132 LKKFLESKG 140>NP_002047 Length = 681 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 + KFL+S+G Sbjct: 132 LKKFLESKG 140>NP_068375 Length = 941 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISKFLDSQ 8 I KFLD+Q Sbjct: 424 IRKFLDAQ 431>NP_001263407 Length = 482 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 + KFL SQG Sbjct: 93 LGKFLRSQG 101>NP_004959 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 + KFL SQG Sbjct: 94 LGKFLRSQG 102>NP_001129492 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 + KFL SQG Sbjct: 94 LGKFLRSQG 102>NP_071682 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 + KFL SQG Sbjct: 94 LGKFLRSQG 102>NP_898898 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKFLDSQG 9 ++FLD QG Sbjct: 465 NRFLDDQG 472>NP_778238 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKFLDSQG 9 S+F DSQG Sbjct: 519 SEFRDSQG 526>XP_006715783 Length = 482 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 + KFL SQG Sbjct: 93 LGKFLRSQG 101>XP_005249793 Length = 482 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 + KFL SQG Sbjct: 93 LGKFLRSQG 101>XP_005249792 Length = 482 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 + KFL SQG Sbjct: 93 LGKFLRSQG 101>XP_006715782 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 + KFL SQG Sbjct: 94 LGKFLRSQG 102>XP_006715781 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 + KFL SQG Sbjct: 94 LGKFLRSQG 102>XP_006715780 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 + KFL SQG Sbjct: 94 LGKFLRSQG 102>XP_005262777 Length = 332 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKFLDSQG 9 ++FLD QG Sbjct: 253 NRFLDDQG 260>XP_005262774 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKFLDSQG 9 ++FLD QG Sbjct: 483 NRFLDDQG 490>NP_006840 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKFLDSQG 9 SKFLD+ G Sbjct: 488 SKFLDNGG 495>NP_004084 Length = 333 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SKFLDSQG 9 SKFL QG Sbjct: 40 SKFLPGQG 47>NP_001034 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 I KFL +QG Sbjct: 574 IYKFLSTQG 582>NP_002431 Length = 936 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ISKFLDSQ 8 IS+FLD++ Sbjct: 389 ISRFLDTE 396>NP_002106 Length = 923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ISKFLDSQ 8 +S+FLD+Q Sbjct: 147 LSEFLDAQ 154>NP_001165972 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 I KFL +QG Sbjct: 574 IYKFLSTQG 582>NP_001165973 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 I KFL +QG Sbjct: 469 IYKFLSTQG 477>NP_056052 Length = 1354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SKFLDS 7 SKFLDS Sbjct: 1132 SKFLDS 1137>NP_005101 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 + KFL+S+G Sbjct: 129 LRKFLESKG 137>NP_001074003 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISKFLDSQ 8 I KF+D+Q Sbjct: 2025 IKKFIDTQ 2032>NP_001165975 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 I KFL +QG Sbjct: 574 IYKFLSTQG 582>XP_006721326 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 I KFL +QG Sbjct: 574 IYKFLSTQG 582>XP_005254452 Length = 2188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISKFLDSQ 8 I KF+D+Q Sbjct: 1999 IKKFIDTQ 2006>XP_005254451 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ISKFLDSQ 8 I KF+D+Q Sbjct: 2025 IKKFIDTQ 2032>XP_006715005 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 + KFL+S+G Sbjct: 129 LRKFLESKG 137>NP_777557 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ISKFLDS 7 ++KFLDS Sbjct: 157 VNKFLDS 163>NP_001020332 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FLDSQG 9 FLD+QG Sbjct: 369 FLDAQG 374>NP_000097 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FLDSQG 9 FLD+QG Sbjct: 420 FLDAQG 425>NP_000431 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ISKFLDS 7 + KFLDS Sbjct: 9 VEKFLDS 15>NP_006436 Length = 2335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SKFLDSQ 8 S+F+DSQ Sbjct: 1377 SEFIDSQ 1383>NP_001860 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 + FL+SQG Sbjct: 77 VKVFLESQG 85>NP_997077 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 +SK L SQG Sbjct: 779 VSKRLQSQG 787>NP_001269360 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ++KF ++QG Sbjct: 111 VTKFAENQG 119>XP_006726383 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FLDSQG 9 FLD+QG Sbjct: 421 FLDAQG 426>XP_005278414 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FLDSQG 9 FLD+QG Sbjct: 320 FLDAQG 325>XP_006726380 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FLDSQG 9 FLD+QG Sbjct: 421 FLDAQG 426>XP_005278411 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FLDSQG 9 FLD+QG Sbjct: 320 FLDAQG 325>XP_006724220 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FLDSQG 9 FLD+QG Sbjct: 361 FLDAQG 366>XP_005269367 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ISKFLDSQG 9 I F DSQG Sbjct: 658 IISFYDSQG 666>NP_689912 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ISKFLDSQG 9 I F DSQG Sbjct: 658 IISFYDSQG 666>NP_001812 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ISKFLDSQG 9 +SK L SQG Sbjct: 234 VSKLLYSQG 242>NP_005728 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 ISKFLDSQG 9 ++KF ++QG Sbjct: 111 VTKFAENQG 119Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.136 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 507,045 Number of extensions: 1119 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |