Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003855 18 1482 NP_733751 18 1935 NP_001124535 18 1935 NP_001124534 18 1935 NP_078908 18 1935 XP_006716142 18 1935 XP_005250088 18 1935 XP_006716141 18 1935 XP_005250085 18 1935 XP_006716140 18 1935 XP_005250084 18 1935 XP_005250083 18 1935 XP_005250082 18 1935 NP_001277403 15 9605 NP_055622 15 9605 NP_001273387 15 9605 NP_775105 15 9605 NP_001073996 15 9605 NP_001036148 15 9605 NP_076404 15 9605 NP_003461 15 9605 NP_001273386 15 9605 XP_006719011 15 9605 XP_006715506 15 9605 XP_006715505 15 9605 XP_006715504 15 9605 XP_006715503 15 9605 XP_006715502 15 9605 XP_005263028 15 9605 XP_006712602 15 9605 NP_001088 15 9605>NP_003855 Length = 220 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SFSRRIQK 9 SFS+RIQK Sbjct: 84 SFSKRIQK 91>NP_733751 Length = 4911 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 IS SRRIQK Sbjct: 4870 ISSSRRIQK 4878>NP_001124535 Length = 137 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SFSRRIQK 9 SFS+R+QK Sbjct: 46 SFSKRVQK 53>NP_001124534 Length = 142 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SFSRRIQK 9 SFS+R+QK Sbjct: 46 SFSKRVQK 53>NP_078908 Length = 183 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SFSRRIQK 9 SFS+R+QK Sbjct: 46 SFSKRVQK 53>XP_006716142 Length = 4927 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 IS SRRIQK Sbjct: 4886 ISSSRRIQK 4894>XP_005250088 Length = 4928 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 IS SRRIQK Sbjct: 4887 ISSSRRIQK 4895>XP_006716141 Length = 4959 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 IS SRRIQK Sbjct: 4918 ISSSRRIQK 4926>XP_005250085 Length = 4979 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 IS SRRIQK Sbjct: 4938 ISSSRRIQK 4946>XP_006716140 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 IS SRRIQK Sbjct: 4941 ISSSRRIQK 4949>XP_005250084 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 IS SRRIQK Sbjct: 4941 ISSSRRIQK 4949>XP_005250083 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 IS SRRIQK Sbjct: 4941 ISSSRRIQK 4949>XP_005250082 Length = 4983 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 IS SRRIQK Sbjct: 4942 ISSSRRIQK 4950>NP_001277403 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SFSRRIQK 9 SFSRR+ K Sbjct: 681 SFSRRLIK 688>NP_055622 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SFSRRIQK 9 SFSRR+ K Sbjct: 682 SFSRRLIK 689>NP_001273387 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SFSRRI 7 SFSRRI Sbjct: 50 SFSRRI 55>NP_775105 Length = 1659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 +SFS+ I+K Sbjct: 77 VSFSKPIEK 85>NP_001073996 Length = 2116 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SRRIQK 9 SRRIQK Sbjct: 1768 SRRIQK 1773>NP_001036148 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 +SFS+ I+K Sbjct: 77 VSFSKPIEK 85>NP_076404 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SFSRRIQK 9 SFSRR+ K Sbjct: 320 SFSRRLFK 327>NP_003461 Length = 1102 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SFSRRI 7 SFSRRI Sbjct: 149 SFSRRI 154>NP_001273386 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SFSRRI 7 SFSRRI Sbjct: 133 SFSRRI 138>XP_006719011 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SFSRRIQK 9 SFSRR+ K Sbjct: 645 SFSRRLIK 652>XP_006715506 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 +SFS+ I+K Sbjct: 77 VSFSKPIEK 85>XP_006715505 Length = 1673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 +SFS+ I+K Sbjct: 77 VSFSKPIEK 85>XP_006715504 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 +SFS+ I+K Sbjct: 77 VSFSKPIEK 85>XP_006715503 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 +SFS+ I+K Sbjct: 77 VSFSKPIEK 85>XP_006715502 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ISFSRRIQK 9 +SFS+ I+K Sbjct: 77 VSFSKPIEK 85>XP_005263028 Length = 152 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ISFSRR 6 ISFSRR Sbjct: 130 ISFSRR 135>XP_006712602 Length = 2142 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SRRIQK 9 SRRIQK Sbjct: 1794 SRRIQK 1799>NP_001088 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ISFSRRIQK 9 +SF++R+Q+ Sbjct: 382 LSFAKRLQQ 390Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.140 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 410,828 Number of extensions: 490 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |