Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003310 17 3301 NP_597676 17 3301 NP_001243779 17 3301 NP_596869 17 3301 XP_005246888 17 3301 XP_006712788 17 3301 XP_006712787 17 3301 XP_006712786 17 3301 NP_001254479 17 3301 NP_597681 17 3301 NP_005742 17 4312 NP_671714 17 4312 XP_006715890 17 4312 XP_005250160 17 4312 XP_005250159 17 4312 NP_006653 16 5631 NP_848622 16 7355 NP_001245141 16 7355 NP_002109 16 7355 NP_659425 15 9605>NP_003310 Length = 26926 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 I A+TLG+S Sbjct: 9874 IKAMTLGVS 9882>NP_597676 Length = 27051 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 I A+TLG+S Sbjct: 9999 IKAMTLGVS 10007>NP_001243779 Length = 34350 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 I A+TLG+S Sbjct: 17298 IKAMTLGVS 17306>NP_596869 Length = 33423 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 I A+TLG+S Sbjct: 16371 IKAMTLGVS 16379>XP_005246888 Length = 22663 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 I A+TLG+S Sbjct: 5611 IKAMTLGVS 5619>XP_006712788 Length = 24022 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 I A+TLG+S Sbjct: 6970 IKAMTLGVS 6978>XP_006712787 Length = 33978 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 I A+TLG+S Sbjct: 16926 IKAMTLGVS 16934>XP_006712786 Length = 35484 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 I A+TLG+S Sbjct: 18432 IKAMTLGVS 18440>NP_001254479 Length = 35991 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 I A+TLG+S Sbjct: 18939 IKAMTLGVS 18947>NP_597681 Length = 27118 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 I A+TLG+S Sbjct: 10066 IKAMTLGVS 10074>NP_005742 Length = 3907 Score = 16.5 bits (31), Expect = 4312 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 ISALTL IS Sbjct: 2601 ISALTLRIS 2609>NP_671714 Length = 3899 Score = 16.5 bits (31), Expect = 4312 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 ISALTL IS Sbjct: 2593 ISALTLRIS 2601>XP_006715890 Length = 3860 Score = 16.5 bits (31), Expect = 4312 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 ISALTL IS Sbjct: 2554 ISALTLRIS 2562>XP_005250160 Length = 3939 Score = 16.5 bits (31), Expect = 4312 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 ISALTL IS Sbjct: 2633 ISALTLRIS 2641>XP_005250159 Length = 3952 Score = 16.5 bits (31), Expect = 4312 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 ISALTL IS Sbjct: 2646 ISALTLRIS 2654>NP_006653 Length = 3230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SALTLGIS 9 SALTLG++ Sbjct: 1503 SALTLGLA 1510>NP_848622 Length = 1124 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 IS LT+GI+ Sbjct: 413 ISLLTMGIN 421>NP_001245141 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ISALTLGIS 9 +SAL+LG S Sbjct: 136 VSALSLGTS 144>NP_002109 Length = 263 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ISALTLGI 8 +SA+TLG+ Sbjct: 221 VSAVTLGL 228>NP_659425 Length = 216 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ISALTLGI 8 +SAL LGI Sbjct: 154 VSALLLGI 161Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.134 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 335,541 Number of extensions: 274 Number of successful extensions: 20 Number of sequences better than 10000.0: 20 Number of HSP's gapped: 20 Number of HSP's successfully gapped: 20 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |