Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005849 17 3301 NP_001138882 17 3301 NP_001138880 17 3301 XP_005259763 17 3301 NP_031389 17 3301 NP_001138881 17 3301 NP_056370 17 4312 NP_001026794 17 4312 NP_061159 17 4312 NP_001273428 17 4312 NP_001273425 17 4312 NP_079325 17 4312 NP_001007541 17 4312 NP_001273426 17 4312 NP_001073918 17 4312 XP_005255915 17 4312 XP_005254625 17 4312 XP_005254624 17 4312 XP_006717743 17 4312 XP_005249051 17 4312 NP_003811 16 5631 NP_002717 16 5631 NP_009224 16 5631 NP_060060 16 5631 NP_001239133 16 5631 NP_001002029 16 5631 NP_001229752 16 5631 XP_006725011 16 5631 XP_006725010 16 5631 XP_005267101 16 5631 XP_005265873 16 5631 XP_005265872 16 5631 XP_005245315 16 5631 XP_006711447 16 5631 XP_005245314 16 5631 XP_006711083 16 5631 XP_006711082 16 5631 NP_002637 16 5631 NP_114114 16 5631 NP_776216 16 7355 NP_006776 16 7355 NP_000303 16 7355 XP_006712696 16 7355 XP_005263774 16 7355 XP_005263773 16 7355 XP_005263772 16 7355 NP_004102 15 9605 NP_973726 15 9605 NP_001186148 15 9605 XP_006718748 15 9605 XP_006718747 15 9605 XP_006718746 15 9605 XP_006718745 15 9605 NP_006765 15 9605>NP_005849 Length = 692 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVKFACGV 9 R++FAC V Sbjct: 387 RIQFACSV 394>NP_001138882 Length = 382 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IRVKFAC 7 +RV+FAC Sbjct: 50 LRVRFAC 56>NP_001138880 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IRVKFAC 7 +RV+FAC Sbjct: 139 LRVRFAC 145>XP_005259763 Length = 679 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVKFACGV 9 R++FAC V Sbjct: 374 RIQFACSV 381>NP_031389 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IRVKFAC 7 +RV+FAC Sbjct: 139 LRVRFAC 145>NP_001138881 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IRVKFAC 7 +RV+FAC Sbjct: 139 LRVRFAC 145>NP_056370 Length = 1013 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IRVKFACGV 9 I++K+ CG+ Sbjct: 663 IKIKYFCGL 671>NP_001026794 Length = 1061 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IRVKFACGV 9 I++K+ CG+ Sbjct: 663 IKIKYFCGL 671>NP_061159 Length = 1361 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RVKFACG 8 RV+F CG Sbjct: 398 RVRFLCG 404>NP_001273428 Length = 588 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVKFACGV 9 +V+F CGV Sbjct: 460 QVRFLCGV 467>NP_001273425 Length = 641 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVKFACGV 9 +V+F CGV Sbjct: 513 QVRFLCGV 520>NP_079325 Length = 641 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVKFACGV 9 +V+F CGV Sbjct: 513 QVRFLCGV 520>NP_001007541 Length = 788 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IRVKFACG 8 +++KF CG Sbjct: 99 VQLKFTCG 106>NP_001273426 Length = 707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVKFACGV 9 +V+F CGV Sbjct: 513 QVRFLCGV 520>NP_001073918 Length = 1060 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IRVKFACG 8 +R+ +ACG Sbjct: 662 VRILYACG 669>XP_005255915 Length = 1099 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVKFACGV 9 RV+F CG+ Sbjct: 25 RVEFLCGL 32>XP_005254625 Length = 1361 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RVKFACG 8 RV+F CG Sbjct: 398 RVRFLCG 404>XP_005254624 Length = 1361 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RVKFACG 8 RV+F CG Sbjct: 398 RVRFLCG 404>XP_006717743 Length = 1090 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IRVKFACG 8 +R+ +ACG Sbjct: 692 VRILYACG 699>XP_005249051 Length = 975 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IRVKFACGV 9 I++K+ CG+ Sbjct: 663 IKIKYFCGL 671>NP_003811 Length = 283 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RVKFACG 8 RVK ACG Sbjct: 62 RVKEACG 68>NP_002717 Length = 710 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RVKFAC 7 RVKF+C Sbjct: 170 RVKFSC 175>NP_009224 Length = 1744 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RVKFAC 7 R+KFAC Sbjct: 1613 RMKFAC 1618>NP_060060 Length = 977 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IRVKFACG 8 +++KF CG Sbjct: 691 LQMKFVCG 698>NP_001239133 Length = 1698 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RVKFAC 7 R+KFAC Sbjct: 1567 RMKFAC 1572>NP_001002029 Length = 1744 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RVKFAC 7 R+KFAC Sbjct: 1613 RMKFAC 1618>NP_001229752 Length = 1744 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RVKFAC 7 R+KFAC Sbjct: 1613 RMKFAC 1618>XP_006725011 Length = 193 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RVKFACG 8 RVK ACG Sbjct: 62 RVKEACG 68>XP_006725010 Length = 197 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RVKFACG 8 RVK ACG Sbjct: 62 RVKEACG 68>XP_005267101 Length = 449 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RVKFAC 7 RVKF+C Sbjct: 170 RVKFSC 175>XP_005265873 Length = 262 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 KFACGV 9 KF CGV Sbjct: 163 KFVCGV 168>XP_005265872 Length = 303 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 KFACGV 9 KF CGV Sbjct: 204 KFVCGV 209>XP_005245315 Length = 1607 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IRVKFACG 8 IRV F CG Sbjct: 1051 IRVIFKCG 1058>XP_006711447 Length = 1634 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IRVKFACG 8 IRV F CG Sbjct: 1078 IRVIFKCG 1085>XP_005245314 Length = 1634 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IRVKFACG 8 IRV F CG Sbjct: 1078 IRVIFKCG 1085>XP_006711083 Length = 193 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RVKFACG 8 RVK ACG Sbjct: 62 RVKEACG 68>XP_006711082 Length = 197 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RVKFACG 8 RVK ACG Sbjct: 62 RVKEACG 68>NP_002637 Length = 1634 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 IRVKFACG 8 IRV F CG Sbjct: 1078 IRVIFKCG 1085>NP_114114 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 KFACGV 9 KF CGV Sbjct: 231 KFVCGV 236>NP_776216 Length = 813 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VKFACGV 9 +KF CGV Sbjct: 581 LKFDCGV 587>NP_006776 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VKFACGV 9 +KF CGV Sbjct: 592 LKFDCGV 598>NP_000303 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 VKFACG 8 VKF CG Sbjct: 179 VKFPCG 184>XP_006712696 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 VKFACG 8 VKF CG Sbjct: 187 VKFPCG 192>XP_005263774 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 VKFACG 8 VKF CG Sbjct: 200 VKFPCG 205>XP_005263773 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 VKFACG 8 VKF CG Sbjct: 234 VKFPCG 239>XP_005263772 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 VKFACG 8 VKF CG Sbjct: 240 VKFPCG 245>NP_004102 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 3 VKFACG 8 +KF CG Sbjct: 307 IKFMCG 312>NP_973726 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 KFACGV 9 K+ACG+ Sbjct: 454 KYACGL 459>NP_001186148 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 VKFAC 7 VKFAC Sbjct: 110 VKFAC 114>XP_006718748 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 KFACGV 9 K+ACG+ Sbjct: 458 KYACGL 463>XP_006718747 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 KFACGV 9 K+ACG+ Sbjct: 455 KYACGL 460>XP_006718746 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 KFACGV 9 K+ACG+ Sbjct: 458 KYACGL 463>XP_006718745 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 KFACGV 9 K+ACG+ Sbjct: 458 KYACGL 463>NP_006765 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 VKFAC 7 VKFAC Sbjct: 111 VKFAC 115Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.154 0.522 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 554,309 Number of extensions: 647 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |