Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 20 509 NP_000242 20 509 XP_005264389 20 509 NP_000746 17 4312 NP_001244292 17 4312 XP_005251766 17 4312 XP_005251765 17 4312 XP_005251764 17 4312 XP_005251763 17 4312 XP_005273450 17 4312 XP_005273448 17 4312 NP_116166 16 5631 XP_006716388 16 5631 NP_001002814 16 7355 NP_079427 16 7355 NP_808224 16 7355 NP_057241 16 7355 NP_001034794 16 7355 XP_006724668 16 7355 XP_006724667 16 7355 XP_006724666 16 7355 XP_006724665 16 7355 XP_006724664 16 7355 XP_006724663 16 7355 XP_006724662 16 7355 NP_036214 15 9605 NP_079410 15 9605 NP_056996 15 9605 NP_001275964 15 9605 NP_001275963 15 9605 NP_612352 15 9605 NP_958930 15 9605 NP_958929 15 9605 NP_958931 15 9605 XP_005256233 15 9605 XP_005256232 15 9605 XP_005256231 15 9605 XP_005256229 15 9605 XP_005256228 15 9605 XP_005256227 15 9605 XP_006721346 15 9605 XP_005256226 15 9605 XP_006721345 15 9605 XP_006721344 15 9605 XP_006721343 15 9605 XP_005256225 15 9605 XP_005250985 15 9605 XP_006716634 15 9605 XP_005250907 15 9605>NP_001245210 Length = 868 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IRSATKDSL 9 +RSATKDSL Sbjct: 670 LRSATKDSL 678>NP_000242 Length = 934 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IRSATKDSL 9 +RSATKDSL Sbjct: 736 LRSATKDSL 744>XP_005264389 Length = 921 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IRSATKDSL 9 +RSATKDSL Sbjct: 736 LRSATKDSL 744>NP_000746 Length = 626 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IRSATKDSL 9 IRSA+ DSL Sbjct: 468 IRSASMDSL 476>NP_001244292 Length = 605 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IRSATKDSL 9 IRSA+ DSL Sbjct: 447 IRSASMDSL 455>XP_005251766 Length = 605 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IRSATKDSL 9 IRSA+ DSL Sbjct: 447 IRSASMDSL 455>XP_005251765 Length = 605 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IRSATKDSL 9 IRSA+ DSL Sbjct: 447 IRSASMDSL 455>XP_005251764 Length = 622 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IRSATKDSL 9 IRSA+ DSL Sbjct: 464 IRSASMDSL 472>XP_005251763 Length = 627 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IRSATKDSL 9 IRSA+ DSL Sbjct: 469 IRSASMDSL 477>XP_005273450 Length = 264 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IRSATKDSL 9 +RSA +DSL Sbjct: 99 VRSACRDSL 107>XP_005273448 Length = 451 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IRSATKDSL 9 +RSA +DSL Sbjct: 99 VRSACRDSL 107>NP_116166 Length = 1338 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RSATKDSL 9 RSA++DSL Sbjct: 1273 RSASRDSL 1280>XP_006716388 Length = 1314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RSATKDSL 9 RSA++DSL Sbjct: 1249 RSASRDSL 1256>NP_001002814 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 S+TKDSL Sbjct: 384 SSTKDSL 390>NP_079427 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 S+TKDSL Sbjct: 384 SSTKDSL 390>NP_808224 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 +ATKDSL Sbjct: 50 AATKDSL 56>NP_057241 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 +ATKDSL Sbjct: 50 AATKDSL 56>NP_001034794 Length = 1431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 +ATKDSL Sbjct: 50 AATKDSL 56>XP_006724668 Length = 681 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 +ATKDSL Sbjct: 50 AATKDSL 56>XP_006724667 Length = 1387 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 +ATKDSL Sbjct: 6 AATKDSL 12>XP_006724666 Length = 1387 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 +ATKDSL Sbjct: 6 AATKDSL 12>XP_006724665 Length = 1431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 +ATKDSL Sbjct: 50 AATKDSL 56>XP_006724664 Length = 1431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 +ATKDSL Sbjct: 50 AATKDSL 56>XP_006724663 Length = 1431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 +ATKDSL Sbjct: 50 AATKDSL 56>XP_006724662 Length = 1431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 +ATKDSL Sbjct: 50 AATKDSL 56>NP_036214 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 SAT+DSL Sbjct: 402 SATEDSL 408>NP_079410 Length = 2881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 1458 SATKDEL 1464>NP_056996 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRSATKDS 8 IRS+ KDS Sbjct: 654 IRSSLKDS 661>NP_001275964 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ATKDSL 9 ATKDSL Sbjct: 93 ATKDSL 98>NP_001275963 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ATKDSL 9 ATKDSL Sbjct: 170 ATKDSL 175>NP_612352 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ATKDSL 9 ATKDSL Sbjct: 170 ATKDSL 175>NP_958930 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ATKDSL 9 ATKDSL Sbjct: 170 ATKDSL 175>NP_958929 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ATKDSL 9 ATKDSL Sbjct: 170 ATKDSL 175>NP_958931 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ATKDSL 9 ATKDSL Sbjct: 188 ATKDSL 193>XP_005256233 Length = 2391 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 951 SATKDEL 957>XP_005256232 Length = 2424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 984 SATKDEL 990>XP_005256231 Length = 2573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 1458 SATKDEL 1464>XP_005256229 Length = 2881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 1458 SATKDEL 1464>XP_005256228 Length = 2882 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 1458 SATKDEL 1464>XP_005256227 Length = 2897 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 1458 SATKDEL 1464>XP_006721346 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 1458 SATKDEL 1464>XP_005256226 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 1458 SATKDEL 1464>XP_006721345 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 1458 SATKDEL 1464>XP_006721344 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 1458 SATKDEL 1464>XP_006721343 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 1458 SATKDEL 1464>XP_005256225 Length = 2898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SATKDSL 9 SATKD L Sbjct: 1458 SATKDEL 1464>XP_005250985 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRSATKDS 8 IRS+ KDS Sbjct: 654 IRSSLKDS 661>XP_006716634 Length = 1420 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRSATKDS 8 IRS+ KDS Sbjct: 668 IRSSLKDS 675>XP_005250907 Length = 1082 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SATKDSL 9 SAT+DSL Sbjct: 333 SATEDSL 339Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.118 0.276 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 392,593 Number of extensions: 422 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |