Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 869 XP_006716142 19 869 XP_005250088 19 869 XP_006716141 19 869 XP_005250085 19 869 XP_006716140 19 869 XP_005250084 19 869 XP_005250083 19 869 XP_005250082 19 869 NP_056020 17 2528 NP_115565 17 2528 XP_006720028 17 2528 XP_005268363 17 2528 XP_005268362 17 2528 XP_005268358 17 2528 XP_005268360 17 2528 XP_005268357 17 2528 XP_005268356 17 2528 NP_001035877 17 3301 NP_001035814 17 3301 NP_056062 17 3301 XP_006721215 17 3301 XP_006721214 17 3301 XP_006721213 17 3301 XP_006721212 17 3301 XP_005255869 17 3301 XP_006721211 17 3301 NP_579875 16 7355 NP_758847 16 7355 NP_001349 15 9605 NP_001253969 15 9605 NP_004964 15 9605 NP_066554 15 9605 NP_891554 15 9605 NP_001243404 15 9605 XP_005261676 15 9605 XP_006724320 15 9605 XP_005250695 15 9605 XP_005249146 15 9605 NP_001929 15 9605 NP_115540 15 9605>NP_733751 Length = 4911 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRQRSELFF 9 IRQRSE FF Sbjct: 3076 IRQRSEPFF 3084>XP_006716142 Length = 4927 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRQRSELFF 9 IRQRSE FF Sbjct: 3093 IRQRSEPFF 3101>XP_005250088 Length = 4928 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRQRSELFF 9 IRQRSE FF Sbjct: 3093 IRQRSEPFF 3101>XP_006716141 Length = 4959 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRQRSELFF 9 IRQRSE FF Sbjct: 3093 IRQRSEPFF 3101>XP_005250085 Length = 4979 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRQRSELFF 9 IRQRSE FF Sbjct: 3093 IRQRSEPFF 3101>XP_006716140 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRQRSELFF 9 IRQRSE FF Sbjct: 3093 IRQRSEPFF 3101>XP_005250084 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRQRSELFF 9 IRQRSE FF Sbjct: 3093 IRQRSEPFF 3101>XP_005250083 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRQRSELFF 9 IRQRSE FF Sbjct: 3092 IRQRSEPFF 3100>XP_005250082 Length = 4983 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRQRSELFF 9 IRQRSE FF Sbjct: 3093 IRQRSEPFF 3101>NP_056020 Length = 1134 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R+R ELFF Sbjct: 465 REREELFF 472>NP_115565 Length = 1191 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R+R ELFF Sbjct: 465 REREELFF 472>XP_006720028 Length = 1134 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R+R ELFF Sbjct: 465 REREELFF 472>XP_005268363 Length = 1134 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R+R ELFF Sbjct: 465 REREELFF 472>XP_005268362 Length = 1134 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R+R ELFF Sbjct: 465 REREELFF 472>XP_005268358 Length = 1139 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R+R ELFF Sbjct: 465 REREELFF 472>XP_005268360 Length = 1139 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R+R ELFF Sbjct: 465 REREELFF 472>XP_005268357 Length = 1171 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R+R ELFF Sbjct: 465 REREELFF 472>XP_005268356 Length = 1192 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R+R ELFF Sbjct: 465 REREELFF 472>NP_001035877 Length = 953 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R RSELF+ Sbjct: 346 RNRSELFY 353>NP_001035814 Length = 953 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R RSELF+ Sbjct: 346 RNRSELFY 353>NP_056062 Length = 956 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R RSELF+ Sbjct: 349 RNRSELFY 356>XP_006721215 Length = 943 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R RSELF+ Sbjct: 346 RNRSELFY 353>XP_006721214 Length = 953 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R RSELF+ Sbjct: 346 RNRSELFY 353>XP_006721213 Length = 953 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R RSELF+ Sbjct: 346 RNRSELFY 353>XP_006721212 Length = 953 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R RSELF+ Sbjct: 346 RNRSELFY 353>XP_005255869 Length = 953 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R RSELF+ Sbjct: 346 RNRSELFY 353>XP_006721211 Length = 953 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R RSELF+ Sbjct: 346 RNRSELFY 353>NP_579875 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R+R+E FF Sbjct: 56 RERNEYFF 63>NP_758847 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQRSELFF 9 R+R+E FF Sbjct: 56 RERNEYFF 63>NP_001349 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IRQRSEL 7 +RQRS+L Sbjct: 280 VRQRSDL 286>NP_001253969 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRQRSELF 8 +RQR +LF Sbjct: 921 LRQRRQLF 928>NP_004964 Length = 1246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRQRSELF 8 +RQR +LF Sbjct: 1093 LRQRRQLF 1100>NP_066554 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RQRSEL 7 RQRSEL Sbjct: 344 RQRSEL 349>NP_891554 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRQRSELFF 9 +RQ SEL + Sbjct: 792 LRQESELMY 800>NP_001243404 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RQRSEL 7 RQRSEL Sbjct: 360 RQRSEL 365>XP_005261676 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RQRSEL 7 RQRSEL Sbjct: 344 RQRSEL 349>XP_006724320 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RQRSEL 7 RQRSEL Sbjct: 344 RQRSEL 349>XP_005250695 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQRSELF 8 +QRS+LF Sbjct: 161 KQRSDLF 167Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQRSELF 8 +QRS+LF Sbjct: 272 KQRSDLF 278>XP_005249146 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRQRSELF 8 +RQR +LF Sbjct: 921 LRQRRQLF 928>NP_001929 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRQRSELF 8 +RQ+ ELF Sbjct: 119 LRQQQELF 126>NP_115540 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQRSELF 8 +QRS+LF Sbjct: 368 KQRSDLF 374Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQRSELF 8 +QRS+LF Sbjct: 479 KQRSDLF 485Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.348 0.155 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 399,099 Number of extensions: 573 Number of successful extensions: 43 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |