Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055752 17 3301 NP_001230124 17 3301 XP_006717783 17 3301 XP_006717782 17 3301 NP_001073286 17 4312 NP_000201 17 4312 NP_689763 17 4312 XP_006714820 17 4312 XP_005268437 17 4312 XP_006712574 17 4312 XP_006712573 17 4312 NP_079410 16 5631 NP_001184037 16 5631 NP_001184043 16 5631 NP_001184042 16 5631 NP_055871 16 5631 NP_001184038 16 5631 NP_001184036 16 5631 XP_006726461 16 5631 XP_005256233 16 5631 XP_005256232 16 5631 XP_005256231 16 5631 XP_005256229 16 5631 XP_005256228 16 5631 XP_005256227 16 5631 XP_006721346 16 5631 XP_005256226 16 5631 XP_006721345 16 5631 XP_006721344 16 5631 XP_006721343 16 5631 XP_005256225 16 5631 XP_005265945 16 5631 NP_055390 16 5631 NP_001188412 16 7355 NP_001419 16 7355 NP_055973 16 7355 NP_001243805 16 7355 NP_694856 16 7355 NP_001243806 16 7355 XP_006716811 16 7355 XP_006716810 16 7355 XP_005251476 16 7355 XP_005251475 16 7355 XP_005251473 16 7355 XP_005251474 16 7355 XP_005251472 16 7355 XP_005251471 16 7355 XP_005251470 16 7355 XP_006716809 16 7355 XP_006716808 16 7355 XP_006716807 16 7355 XP_006716806 16 7355 XP_005251468 16 7355 XP_005251467 16 7355 XP_006710496 16 7355 NP_003360 15 9605 XP_006718738 15 9605 XP_006718737 15 9605 XP_006718736 15 9605 XP_005274266 15 9605 XP_005252603 15 9605 NP_000929 15 9605>NP_055752 Length = 1132 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRQKTAIGK 9 IRQK +GK Sbjct: 68 IRQKALVGK 76>NP_001230124 Length = 219 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRQKTAIGK 9 IRQK +GK Sbjct: 68 IRQKALVGK 76>XP_006717783 Length = 641 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRQKTAIGK 9 IRQK +GK Sbjct: 68 IRQKALVGK 76>XP_006717782 Length = 1089 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRQKTAIGK 9 IRQK +GK Sbjct: 68 IRQKALVGK 76>NP_001073286 Length = 1091 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRQKTAIG 8 +RQKTA G Sbjct: 483 LRQKTACG 490>NP_000201 Length = 1073 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRQKTAIG 8 +RQKTA G Sbjct: 483 LRQKTACG 490>NP_689763 Length = 729 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IRQKTAIGK 9 +R+K+A+GK Sbjct: 703 LRRKSALGK 711>XP_006714820 Length = 729 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IRQKTAIGK 9 +R+K+A+GK Sbjct: 703 LRRKSALGK 711>XP_005268437 Length = 735 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IRQKTAIGK 9 +R+K+A+GK Sbjct: 709 LRRKSALGK 717>XP_006712574 Length = 1058 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRQKTAIG 8 +RQKTA G Sbjct: 483 LRQKTACG 490>XP_006712573 Length = 1076 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRQKTAIG 8 +RQKTA G Sbjct: 483 LRQKTACG 490>NP_079410 Length = 2881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 588 LKEKTKIGK 596>NP_001184037 Length = 255 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRQKTAIG 8 IRQK A+G Sbjct: 30 IRQKLALG 37>NP_001184043 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRQKTAIG 8 IRQK A+G Sbjct: 311 IRQKLALG 318>NP_001184042 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRQKTAIG 8 IRQK A+G Sbjct: 338 IRQKLALG 345>NP_055871 Length = 758 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RQKTAIGK 9 ++KTA+GK Sbjct: 262 KKKTALGK 269>NP_001184038 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRQKTAIG 8 IRQK A+G Sbjct: 19 IRQKLALG 26>NP_001184036 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRQKTAIG 8 IRQK A+G Sbjct: 249 IRQKLALG 256>XP_006726461 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +RQKTA G+ Sbjct: 275 LRQKTAGGR 283>XP_005256233 Length = 2391 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 81 LKEKTKIGK 89>XP_005256232 Length = 2424 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 114 LKEKTKIGK 122>XP_005256231 Length = 2573 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 588 LKEKTKIGK 596>XP_005256229 Length = 2881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 588 LKEKTKIGK 596>XP_005256228 Length = 2882 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 588 LKEKTKIGK 596>XP_005256227 Length = 2897 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 588 LKEKTKIGK 596>XP_006721346 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 588 LKEKTKIGK 596>XP_005256226 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 588 LKEKTKIGK 596>XP_006721345 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 588 LKEKTKIGK 596>XP_006721344 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 588 LKEKTKIGK 596>XP_006721343 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 588 LKEKTKIGK 596>XP_005256225 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 +++KT IGK Sbjct: 588 LKEKTKIGK 596>XP_005265945 Length = 430 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRQKTAIGK 9 I+ +TA+GK Sbjct: 414 IKMRTALGK 422>NP_055390 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRQKTAIG 8 IRQK A+G Sbjct: 262 IRQKLALG 269>NP_001188412 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTAIGK 9 KTAIGK Sbjct: 135 KTAIGK 140>NP_001419 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTAIGK 9 KTAIGK Sbjct: 228 KTAIGK 233>NP_055973 Length = 1352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 891 QKTSLGK 897>NP_001243805 Length = 1352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 891 QKTSLGK 897>NP_694856 Length = 1194 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 733 QKTSLGK 739>NP_001243806 Length = 1352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 891 QKTSLGK 897>XP_006716811 Length = 1120 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 891 QKTSLGK 897>XP_006716810 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 733 QKTSLGK 739>XP_005251476 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 733 QKTSLGK 739>XP_005251475 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 733 QKTSLGK 739>XP_005251473 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 733 QKTSLGK 739>XP_005251474 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 733 QKTSLGK 739>XP_005251472 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 733 QKTSLGK 739>XP_005251471 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 733 QKTSLGK 739>XP_005251470 Length = 1284 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 891 QKTSLGK 897>XP_006716809 Length = 1334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 891 QKTSLGK 897>XP_006716808 Length = 1346 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 891 QKTSLGK 897>XP_006716807 Length = 1352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 891 QKTSLGK 897>XP_006716806 Length = 1364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 891 QKTSLGK 897>XP_005251468 Length = 1364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 891 QKTSLGK 897>XP_005251467 Length = 1364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 QKT++GK Sbjct: 891 QKTSLGK 897>XP_006710496 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTAIGK 9 KTAIGK Sbjct: 228 KTAIGK 233>NP_003360 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQKTAIGK 9 RQK A+G+ Sbjct: 253 RQKKALGR 260>XP_006718738 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQKTAIGK 9 RQK A+G+ Sbjct: 253 RQKKALGR 260>XP_006718737 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQKTAIGK 9 RQK A+G+ Sbjct: 253 RQKKALGR 260>XP_006718736 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQKTAIGK 9 RQK A+G+ Sbjct: 253 RQKKALGR 260>XP_005274266 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQKTAIGK 9 RQK A+G+ Sbjct: 106 RQKKALGR 113>XP_005252603 Length = 1457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QKTAIGK 9 +KTA+GK Sbjct: 1440 KKTALGK 1446>NP_000929 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QKTAIGK 9 QKT IGK Sbjct: 145 QKTFIGK 151Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.133 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 390,970 Number of extensions: 505 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |