Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_612369 18 1935 NP_061031 17 2528 NP_001273483 17 2528 NP_001073996 17 3301 XP_006712602 17 3301 XP_006726512 17 4312 XP_006725120 17 4312 XP_005250800 17 4312 XP_005250799 17 4312 XP_006716274 17 4312 NP_001180438 16 5631 NP_060205 16 5631 NP_078815 16 5631 XP_005264473 16 5631 NP_060426 16 5631 NP_919445 16 5631 NP_054878 16 7355 NP_071349 16 7355 NP_001123537 16 7355 NP_001135973 16 7355 NP_115731 16 7355 NP_004136 16 7355 XP_006722821 16 7355 XP_006722820 16 7355 XP_005259972 16 7355 XP_006722819 16 7355 XP_006722818 16 7355 XP_005257625 16 7355 XP_005257624 16 7355 XP_005255063 16 7355 XP_005265151 16 7355 XP_006713182 16 7355 NP_000543 15 9605 NP_056160 15 9605 NP_001188356 15 9605 NP_065816 15 9605 NP_001257449 15 9605 NP_055807 15 9605 NP_002821 15 9605 NP_001077005 15 9605 NP_149077 15 9605 NP_005376 15 9605 NP_001273922 15 9605 XP_005267488 15 9605 XP_005267487 15 9605 XP_006715109 15 9605 XP_006715108 15 9605 XP_006715107 15 9605 XP_006715106 15 9605 XP_006715105 15 9605 XP_006715104 15 9605 XP_006715103 15 9605 XP_006715102 15 9605 XP_005265233 15 9605 XP_005265231 15 9605 XP_006713237 15 9605 XP_006713236 15 9605 XP_006713235 15 9605 XP_006713234 15 9605 XP_005265230 15 9605 XP_006710573 15 9605 XP_006710572 15 9605 XP_006710571 15 9605 XP_006710570 15 9605 XP_006710569 15 9605 XP_006710568 15 9605 XP_006710567 15 9605 XP_006710566 15 9605 XP_005245859 15 9605>NP_612369 Length = 1372 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RNKRAQSC 9 R +RAQSC Sbjct: 1343 RTRRAQSC 1350Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 +RN +Q+C Sbjct: 660 VRNNHSQTC 668>NP_061031 Length = 640 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRNKRAQSC 9 +RN RA++C Sbjct: 317 LRNDRAEAC 325>NP_001273483 Length = 688 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRNKRAQSC 9 +RN RA++C Sbjct: 317 LRNDRAEAC 325>NP_001073996 Length = 2116 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 RNKR Q C Sbjct: 147 RNKRDQCC 154>XP_006712602 Length = 2142 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 RNKR Q C Sbjct: 147 RNKRDQCC 154>XP_006726512 Length = 335 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 +RN+R Q C Sbjct: 267 VRNRRFQLC 275>XP_006725120 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 +RN+R Q C Sbjct: 244 VRNRRFQLC 252>XP_005250800 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 +RN+R Q C Sbjct: 244 VRNRRFQLC 252>XP_005250799 Length = 352 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 +RN+R Q C Sbjct: 284 VRNRRFQLC 292>XP_006716274 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 +RN+R Q C Sbjct: 244 VRNRRFQLC 252>NP_001180438 Length = 793 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 +RNK Q C Sbjct: 488 LRNKEFQEC 496>NP_060205 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 +RNK Q C Sbjct: 538 LRNKEFQEC 546>NP_078815 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRNKRAQS 8 +RN RAQS Sbjct: 208 LRNARAQS 215>XP_005264473 Length = 802 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 +RNK Q C Sbjct: 497 LRNKEFQEC 505>NP_060426 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 + +KRAQ C Sbjct: 93 VPSKRAQGC 101>NP_919445 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRNKRAQS 8 +RN RAQS Sbjct: 234 LRNARAQS 241>NP_054878 Length = 2564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I+N +QSC Sbjct: 1758 IQNTHSQSC 1766>NP_071349 Length = 1292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NKRAQSC 9 +KR QSC Sbjct: 592 DKRVQSC 598>NP_001123537 Length = 2022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 +NK QSC Sbjct: 1162 QNKHIQSC 1169>NP_001135973 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IRNKRAQ 7 +RN+RAQ Sbjct: 90 LRNRRAQ 96>NP_115731 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IRNKRAQ 7 +RN+RAQ Sbjct: 90 LRNRRAQ 96>NP_004136 Length = 2157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 +NK QSC Sbjct: 1162 QNKHIQSC 1169>XP_006722821 Length = 1462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 +NK QSC Sbjct: 1162 QNKHIQSC 1169>XP_006722820 Length = 2140 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 +NK QSC Sbjct: 1162 QNKHIQSC 1169>XP_005259972 Length = 2141 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 +NK QSC Sbjct: 1162 QNKHIQSC 1169>XP_006722819 Length = 2156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 +NK QSC Sbjct: 1162 QNKHIQSC 1169>XP_006722818 Length = 2157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 +NK QSC Sbjct: 1162 QNKHIQSC 1169>XP_005257625 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NKRAQSC 9 +KR QSC Sbjct: 567 DKRVQSC 573>XP_005257624 Length = 1293 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NKRAQSC 9 +KR QSC Sbjct: 592 DKRVQSC 598>XP_005255063 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 RN +QSC Sbjct: 950 RNSSSQSC 957>XP_005265151 Length = 2058 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I+N +QSC Sbjct: 1758 IQNTHSQSC 1766>XP_006713182 Length = 2422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I+N +QSC Sbjct: 1758 IQNTHSQSC 1766>NP_000543 Length = 2813 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNKRAQSC 9 R+KR+ SC Sbjct: 760 RSKRSLSC 767>NP_056160 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 673 IDGRRAQNC 681>NP_001188356 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 673 IDGRRAQNC 681>NP_065816 Length = 5183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 I+NK Q C Sbjct: 4386 IKNKICQDC 4394>NP_001257449 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 678 IDGRRAQNC 686>NP_055807 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 688 IDGRRAQNC 696>NP_002821 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IRNKRA 6 +RNKRA Sbjct: 837 VRNKRA 842>NP_001077005 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 R+K QSC Sbjct: 531 RDKEKQSC 538>NP_149077 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 R+K QSC Sbjct: 531 RDKEKQSC 538>NP_005376 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NKRAQSC 9 N+R++SC Sbjct: 1430 NRRSRSC 1436>NP_001273922 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNKRAQSC 9 R+K QSC Sbjct: 531 RDKEKQSC 538>XP_005267488 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 688 IDGRRAQNC 696>XP_005267487 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 688 IDGRRAQNC 696>XP_006715109 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 682 IDGRRAQNC 690>XP_006715108 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 682 IDGRRAQNC 690>XP_006715107 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 682 IDGRRAQNC 690>XP_006715106 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 682 IDGRRAQNC 690>XP_006715105 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 682 IDGRRAQNC 690>XP_006715104 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 716 IDGRRAQNC 724>XP_006715103 Length = 1167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 772 IDGRRAQNC 780>XP_006715102 Length = 1176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRNKRAQSC 9 I +RAQ+C Sbjct: 781 IDGRRAQNC 789>XP_005265233 Length = 1163 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NKRAQSC 9 N+R++SC Sbjct: 1131 NRRSRSC 1137>XP_005265231 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NKRAQSC 9 N+R++SC Sbjct: 1178 NRRSRSC 1184>XP_006713237 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NKRAQSC 9 N+R++SC Sbjct: 1321 NRRSRSC 1327>XP_006713236 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NKRAQSC 9 N+R++SC Sbjct: 1321 NRRSRSC 1327>XP_006713235 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NKRAQSC 9 N+R++SC Sbjct: 1321 NRRSRSC 1327>XP_006713234 Length = 1436 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NKRAQSC 9 N+R++SC Sbjct: 1404 NRRSRSC 1410>XP_005265230 Length = 1463 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NKRAQSC 9 N+R++SC Sbjct: 1431 NRRSRSC 1437>XP_006710573 Length = 5177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 I+NK Q C Sbjct: 4380 IKNKICQDC 4388>XP_006710572 Length = 5188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 I+NK Q C Sbjct: 4391 IKNKICQDC 4399>XP_006710571 Length = 5194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 I+NK Q C Sbjct: 4397 IKNKICQDC 4405>XP_006710570 Length = 5195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 I+NK Q C Sbjct: 4398 IKNKICQDC 4406>XP_006710569 Length = 5212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 I+NK Q C Sbjct: 4415 IKNKICQDC 4423>XP_006710568 Length = 5221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 I+NK Q C Sbjct: 4424 IKNKICQDC 4432>XP_006710567 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 I+NK Q C Sbjct: 4425 IKNKICQDC 4433>XP_006710566 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 I+NK Q C Sbjct: 4425 IKNKICQDC 4433>XP_005245859 Length = 5223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IRNKRAQSC 9 I+NK Q C Sbjct: 4426 IKNKICQDC 4434Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.125 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 471,968 Number of extensions: 755 Number of successful extensions: 70 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |