Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001165349 17 2528 NP_001165350 17 2528 NP_005360 17 2528 NP_001165347 17 2528 XP_006724820 17 2528 XP_005262471 17 2528 XP_005262470 17 2528 NP_001165348 17 2528 NP_001093325 17 2528 NP_001159827 16 5631 NP_000102 16 5631 XP_006715936 16 5631 NP_065805 16 7355 NP_055871 16 7355 XP_005247728 16 7355 XP_006713777 16 7355 NP_036222 15 9605 NP_001009571 15 9605 NP_060424 15 9605 NP_001161412 15 9605 NP_055454 15 9605 XP_005250765 15 9605 XP_005250764 15 9605 XP_005250763 15 9605 XP_005250762 15 9605 XP_005250761 15 9605 XP_005250760 15 9605 XP_005250759 15 9605 XP_005250758 15 9605 XP_005250757 15 9605 XP_005250756 15 9605 XP_005250755 15 9605 XP_005250754 15 9605 XP_005250753 15 9605 XP_005250752 15 9605 XP_005249641 15 9605 XP_006710603 15 9605 XP_006710602 15 9605 XP_006710601 15 9605 XP_006710600 15 9605 XP_005270757 15 9605 XP_006710599 15 9605 XP_006710598 15 9605 XP_006710597 15 9605 XP_006710596 15 9605 XP_006710595 15 9605 XP_006710594 15 9605 XP_006710593 15 9605 XP_006710592 15 9605 XP_006710591 15 9605 XP_006710590 15 9605 XP_006710589 15 9605 XP_006710588 15 9605 XP_006710587 15 9605 XP_006710586 15 9605 XP_006710585 15 9605 XP_005270755 15 9605 XP_006710584 15 9605 XP_005270754 15 9605 XP_005270753 15 9605 XP_006710583 15 9605 XP_005270752 15 9605 XP_006710582 15 9605 XP_005270751 15 9605 NP_066939 15 9605>NP_001165349 Length = 860 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 RLRLD YL Sbjct: 621 RLRLDSYL 628>NP_001165350 Length = 941 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 RLRLD YL Sbjct: 637 RLRLDSYL 644>NP_005360 Length = 925 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 RLRLD YL Sbjct: 621 RLRLDSYL 628>NP_001165347 Length = 1001 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 RLRLD YL Sbjct: 697 RLRLDSYL 704>XP_006724820 Length = 902 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 RLRLD YL Sbjct: 598 RLRLDSYL 605>XP_005262471 Length = 1005 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 RLRLD YL Sbjct: 766 RLRLDSYL 773>XP_005262470 Length = 1044 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 RLRLD YL Sbjct: 740 RLRLDSYL 747>NP_001165348 Length = 821 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 RLRLD YL Sbjct: 582 RLRLDSYL 589>NP_001093325 Length = 985 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 RLRLD YL Sbjct: 681 RLRLDSYL 688>NP_001159827 Length = 308 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RLRLDLY 8 RLRLD Y Sbjct: 7 RLRLDTY 13>NP_000102 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IRLRLDLYL 9 IR+++D+Y+ Sbjct: 675 IRIKVDVYI 683>XP_006715936 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IRLRLDLYL 9 IR+++D+Y+ Sbjct: 675 IRIKVDVYI 683>NP_065805 Length = 1444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 +LR DLY+ Sbjct: 812 KLRTDLYI 819>NP_055871 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RLRLDLY 8 RLRLD Y Sbjct: 111 RLRLDKY 117>XP_005247728 Length = 1413 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 +LR DLY+ Sbjct: 781 KLRTDLYI 788>XP_006713777 Length = 1424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 +LR DLY+ Sbjct: 792 KLRTDLYI 799>NP_036222 Length = 5430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1056 IRLRLEEY 1063>NP_001009571 Length = 1255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>NP_060424 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>NP_001161412 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>NP_055454 Length = 1564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RLDLYL 9 R+DLYL Sbjct: 1296 RIDLYL 1301>XP_005250765 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250764 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250763 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250762 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250761 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250760 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250759 Length = 1293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250758 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250757 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250756 Length = 1301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250755 Length = 1303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250754 Length = 1305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250753 Length = 1305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005250752 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLRLDLYL 9 R+RL LY+ Sbjct: 82 RIRLQLYV 89>XP_005249641 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IRLRLD 6 IRLRLD Sbjct: 807 IRLRLD 812>XP_006710603 Length = 5324 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1056 IRLRLEEY 1063>XP_006710602 Length = 7391 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1056 IRLRLEEY 1063>XP_006710601 Length = 4720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_006710600 Length = 5384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1056 IRLRLEEY 1063>XP_005270757 Length = 5460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_006710599 Length = 5656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_006710598 Length = 7553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1046 IRLRLEEY 1053>XP_006710597 Length = 7451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1056 IRLRLEEY 1063>XP_006710596 Length = 7512 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1005 IRLRLEEY 1012>XP_006710595 Length = 7526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1019 IRLRLEEY 1026>XP_006710594 Length = 7528 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1021 IRLRLEEY 1028>XP_006710593 Length = 7539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1032 IRLRLEEY 1039>XP_006710592 Length = 7544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1037 IRLRLEEY 1044>XP_006710591 Length = 7558 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1051 IRLRLEEY 1058>XP_006710590 Length = 7563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1056 IRLRLEEY 1063>XP_006710589 Length = 7595 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1088 IRLRLEEY 1095>XP_006710588 Length = 7614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_006710587 Length = 7645 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_006710586 Length = 7645 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_006710585 Length = 7657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_005270755 Length = 7663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_006710584 Length = 7686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_005270754 Length = 7694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_005270753 Length = 7700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_006710583 Length = 7702 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_005270752 Length = 7717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_006710582 Length = 7720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>XP_005270751 Length = 7723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRLRLDLY 8 IRLRL+ Y Sbjct: 1216 IRLRLEEY 1223>NP_066939 Length = 1119 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IRLRLD 6 IRLRLD Sbjct: 807 IRLRLD 812Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.349 0.172 0.483 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 471,331 Number of extensions: 646 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |