Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 19 665 NP_004450 17 4312 NP_872579 17 4312 XP_005257219 17 4312 XP_005257218 17 4312 XP_005257217 17 4312 XP_005257216 17 4312 XP_005257215 17 4312 XP_005257214 17 4312 XP_005257213 17 4312 XP_005257212 17 4312 XP_006721834 17 4312 XP_005257211 17 4312 XP_005257210 17 4312 XP_005257209 17 4312 XP_005257208 17 4312 XP_006721833 17 4312 XP_005257207 17 4312 NP_079415 16 5631 NP_001258395 16 5631 NP_001124319 16 5631 NP_004199 16 5631 NP_665811 16 5631 NP_001269779 16 5631 NP_065196 16 5631 NP_001116436 16 5631 NP_001271209 16 5631 NP_001271210 16 5631 XP_005267899 16 5631 XP_006720257 16 5631 XP_005264505 16 5631 XP_005264504 16 5631 XP_005264503 16 5631 XP_005264502 16 5631 XP_005264501 16 5631 XP_005264499 16 5631 NP_115646 16 7355 XP_006711023 16 7355 NP_004743 15 9605 NP_055325 15 9605 NP_149015 15 9605 NP_008949 15 9605 NP_060009 15 9605 NP_001244237 15 9605 XP_006721125 15 9605 XP_006717006 15 9605 XP_006717005 15 9605 XP_006717004 15 9605 XP_006717003 15 9605 XP_005251736 15 9605 XP_006715989 15 9605>NP_002430 Length = 1137 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IRDVKSLTV 9 IRDVKSLT+ Sbjct: 998 IRDVKSLTL 1006>NP_004450 Length = 2903 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1577 DIKSLTV 1583>NP_872579 Length = 2920 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1451 DIKSLTV 1457>XP_005257219 Length = 2038 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1577 DIKSLTV 1583>XP_005257218 Length = 2957 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1577 DIKSLTV 1583>XP_005257217 Length = 2961 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1577 DIKSLTV 1583>XP_005257216 Length = 3015 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1577 DIKSLTV 1583>XP_005257215 Length = 3032 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1451 DIKSLTV 1457>XP_005257214 Length = 3094 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1513 DIKSLTV 1519>XP_005257213 Length = 3095 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1514 DIKSLTV 1520>XP_005257212 Length = 3095 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1514 DIKSLTV 1520>XP_006721834 Length = 3100 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1577 DIKSLTV 1583>XP_005257211 Length = 3100 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1577 DIKSLTV 1583>XP_005257210 Length = 3104 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1577 DIKSLTV 1583>XP_005257209 Length = 3148 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1577 DIKSLTV 1583>XP_005257208 Length = 3157 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1576 DIKSLTV 1582>XP_006721833 Length = 3158 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1577 DIKSLTV 1583>XP_005257207 Length = 3158 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DVKSLTV 9 D+KSLTV Sbjct: 1577 DIKSLTV 1583>NP_079415 Length = 665 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDVKSLTV 9 RD KSLT+ Sbjct: 51 RDSKSLTI 58>NP_001258395 Length = 818 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDVKSLTV 9 RD KSLT+ Sbjct: 51 RDSKSLTI 58>NP_001124319 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RDVKSLTV 9 R+VKS+T+ Sbjct: 298 REVKSITI 305>NP_004199 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RDVKSLTV 9 R+VKS+T+ Sbjct: 298 REVKSITI 305>NP_665811 Length = 609 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RDVKSLTV 9 R+VKS+T+ Sbjct: 294 REVKSITI 301>NP_001269779 Length = 817 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 613 VEDIKSLT 620>NP_065196 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 560 VEDIKSLT 567>NP_001116436 Length = 849 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 645 VEDIKSLT 652>NP_001271209 Length = 820 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 597 VEDIKSLT 604>NP_001271210 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 371 VEDIKSLT 378>XP_005267899 Length = 833 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 610 VEDIKSLT 617>XP_006720257 Length = 833 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 610 VEDIKSLT 617>XP_005264505 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 340 VEDIKSLT 347>XP_005264504 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 437 VEDIKSLT 444>XP_005264503 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 560 VEDIKSLT 567>XP_005264502 Length = 789 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 592 VEDIKSLT 599>XP_005264501 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 592 VEDIKSLT 599>XP_005264499 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 + D+KSLT Sbjct: 645 VEDIKSLT 652>NP_115646 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRDVKSLTV 9 +RD+KSL + Sbjct: 538 LRDLKSLKI 546>XP_006711023 Length = 808 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRDVKSLTV 9 +RD+KSL + Sbjct: 543 LRDLKSLKI 551>NP_004743 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IRDVKSLT 8 +R+VKSL+ Sbjct: 405 VREVKSLS 412>NP_055325 Length = 4935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 I+D KSLT Sbjct: 1030 IKDSKSLT 1037>NP_149015 Length = 5142 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 I+D KSLT Sbjct: 1030 IKDSKSLT 1037>NP_008949 Length = 2325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IRDVKSL 7 IR+VKSL Sbjct: 1642 IREVKSL 1648>NP_060009 Length = 4116 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRDVKSLTV 9 I D+K LTV Sbjct: 2379 ITDLKQLTV 2387>NP_001244237 Length = 190 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DVKSLT 8 DVKSLT Sbjct: 19 DVKSLT 24>XP_006721125 Length = 4070 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRDVKSLTV 9 I D+K LTV Sbjct: 2333 ITDLKQLTV 2341>XP_006717006 Length = 1760 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IRDVKSL 7 IR+VKSL Sbjct: 1062 IREVKSL 1068>XP_006717005 Length = 1788 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IRDVKSL 7 IR+VKSL Sbjct: 1090 IREVKSL 1096>XP_006717004 Length = 2240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IRDVKSL 7 IR+VKSL Sbjct: 1642 IREVKSL 1648>XP_006717003 Length = 2278 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IRDVKSL 7 IR+VKSL Sbjct: 1642 IREVKSL 1648>XP_005251736 Length = 2325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IRDVKSL 7 IR+VKSL Sbjct: 1642 IREVKSL 1648>XP_006715989 Length = 5148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IRDVKSLT 8 I+D KSLT Sbjct: 1030 IKDSKSLT 1037Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.137 0.334 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 351,978 Number of extensions: 338 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |