Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003290 20 509 NP_001275514 17 4312 NP_741982 17 4312 NP_478060 17 4312 NP_116246 17 4312 XP_006724081 17 4312 XP_005261206 17 4312 XP_005261205 17 4312 XP_005254200 17 4312 XP_005268213 17 4312 NP_055888 16 5631 NP_001138363 16 5631 NP_057670 16 5631 XP_006723175 16 5631 XP_005258729 16 5631 XP_005258728 16 5631 XP_005256244 16 5631 XP_006721357 16 5631 XP_006721356 16 5631 XP_005267811 16 5631 NP_001153685 16 5631 NP_112583 16 5631 NP_004509 16 7355 NP_742106 16 7355 NP_742105 16 7355 NP_742104 16 7355 NP_004510 16 7355 NP_002679 16 7355 NP_001191753 16 7355 NP_001092906 16 7355 NP_001271294 16 7355 NP_001271293 16 7355 XP_006723855 16 7355 XP_006723854 16 7355 XP_006723853 16 7355 XP_006723852 16 7355 XP_006723851 16 7355 XP_006723850 16 7355 XP_005254346 16 7355 XP_005254347 16 7355 XP_005250971 16 7355 XP_006716618 16 7355 XP_005250970 16 7355 XP_006716617 16 7355 XP_005245422 16 7355 NP_065821 16 7355 NP_115763 15 9605 NP_001164192 15 9605 NP_001164188 15 9605 NP_001164187 15 9605 NP_055382 15 9605 NP_001164186 15 9605 NP_001164189 15 9605 NP_001164185 15 9605 NP_001164190 15 9605 NP_001164191 15 9605 NP_542391 15 9605 XP_006722085 15 9605 XP_006722084 15 9605 XP_005257655 15 9605 XP_005257654 15 9605 XP_005257653 15 9605 XP_005257652 15 9605 XP_006721412 15 9605 XP_005256317 15 9605 XP_005256316 15 9605 XP_005256315 15 9605 XP_006721411 15 9605 XP_005250749 15 9605 XP_006716239 15 9605 NP_071376 15 9605>NP_003290 Length = 803 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IRDML+RIK Sbjct: 694 IRDMLRRIK 702>NP_001275514 Length = 332 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDMLQRIK 9 RD+L RIK Sbjct: 112 RDLLHRIK 119>NP_741982 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDMLQRIK 9 RD+L RIK Sbjct: 112 RDLLHRIK 119>NP_478060 Length = 322 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 RD+LQR++ Sbjct: 141 RDLLQRLR 148>NP_116246 Length = 547 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDMLQRIK 9 RD+L RIK Sbjct: 112 RDLLHRIK 119>XP_006724081 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 RD+LQR++ Sbjct: 141 RDLLQRLR 148>XP_005261206 Length = 296 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 RD+LQR++ Sbjct: 141 RDLLQRLR 148>XP_005261205 Length = 322 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 RD+LQR++ Sbjct: 141 RDLLQRLR 148>XP_005254200 Length = 374 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDMLQRIK 9 RD+L RIK Sbjct: 112 RDLLHRIK 119>XP_005268213 Length = 993 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +D+LQR+K Sbjct: 573 QDLLQRVK 580>NP_055888 Length = 1781 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IR+++QR+K Sbjct: 948 IREIVQRLK 956>NP_001138363 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDMLQRIK 9 RD+ QRIK Sbjct: 269 RDIYQRIK 276>NP_057670 Length = 344 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDMLQRIK 9 RD+ QRIK Sbjct: 269 RDIYQRIK 276>XP_006723175 Length = 1094 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IR+++QR+K Sbjct: 261 IREIVQRLK 269>XP_005258729 Length = 1780 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IR+++QR+K Sbjct: 948 IREIVQRLK 956>XP_005258728 Length = 1781 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IR+++QR+K Sbjct: 948 IREIVQRLK 956>XP_005256244 Length = 807 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRDMLQRIK 9 + DML RIK Sbjct: 584 MNDMLDRIK 592>XP_006721357 Length = 1017 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRDMLQRIK 9 + DML RIK Sbjct: 584 MNDMLDRIK 592>XP_006721356 Length = 1017 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRDMLQRIK 9 + DML RIK Sbjct: 584 MNDMLDRIK 592>XP_005267811 Length = 322 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDMLQRIK 9 RD+ QRIK Sbjct: 247 RDIYQRIK 254>NP_001153685 Length = 882 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRDMLQRIK 9 + DML RIK Sbjct: 439 MNDMLDRIK 447>NP_112583 Length = 1007 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRDMLQRIK 9 + DML RIK Sbjct: 584 MNDMLDRIK 592>NP_004509 Length = 844 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 549 DMLSRIK 555>NP_742106 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 546 DMLSRIK 552>NP_742105 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 577 DMLSRIK 583>NP_742104 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 559 DMLSRIK 565>NP_004510 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 556 DMLSRIK 562>NP_002679 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 +++MLQR+K Sbjct: 355 MQEMLQRMK 363>NP_001191753 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 436 DMLSRIK 442>NP_001092906 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDMLQRI 8 RD+LQR+ Sbjct: 287 RDLLQRL 293>NP_001271294 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDMLQRI 8 RD+LQR+ Sbjct: 127 RDLLQRL 133>NP_001271293 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDMLQRI 8 RD+LQR+ Sbjct: 287 RDLLQRL 293>XP_006723855 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 547 DMLSRIK 553>XP_006723854 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 549 DMLSRIK 555>XP_006723853 Length = 868 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 559 DMLSRIK 565>XP_006723852 Length = 876 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 567 DMLSRIK 573>XP_006723851 Length = 885 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 576 DMLSRIK 582>XP_006723850 Length = 886 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 577 DMLSRIK 583>XP_005254346 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDMLQRI 8 RD+LQR+ Sbjct: 255 RDLLQRL 261>XP_005254347 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDMLQRI 8 RD+LQR+ Sbjct: 255 RDLLQRL 261>XP_005250971 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 141 DMLSRIK 147>XP_006716618 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 320 DMLSRIK 326>XP_005250970 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 357 DMLSRIK 363>XP_006716617 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DMLQRIK 9 DML RIK Sbjct: 447 DMLSRIK 453>XP_005245422 Length = 1203 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRDMLQRIK 9 +RD LQR++ Sbjct: 763 LRDKLQRLE 771>NP_065821 Length = 1203 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRDMLQRIK 9 +RD LQR++ Sbjct: 763 LRDKLQRLE 771>NP_115763 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IR+++QR++ Sbjct: 737 IREIIQRVE 745>NP_001164192 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 634 QDMVERVK 641>NP_001164188 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 862 QDMVERVK 869>NP_001164187 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 862 QDMVERVK 869>NP_055382 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 844 QDMVERVK 851>NP_001164186 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 862 QDMVERVK 869>NP_001164189 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 844 QDMVERVK 851>NP_001164185 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 890 QDMVERVK 897>NP_001164190 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 842 QDMVERVK 849>NP_001164191 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 696 QDMVERVK 703>NP_542391 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IRDMLQR 7 +RD+LQR Sbjct: 37 LRDVLQR 43>XP_006722085 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IR+++QR++ Sbjct: 401 IREIIQRVE 409>XP_006722084 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IR+++QR++ Sbjct: 401 IREIIQRVE 409>XP_005257655 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IR+++QR++ Sbjct: 429 IREIIQRVE 437>XP_005257654 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IR+++QR++ Sbjct: 737 IREIIQRVE 745>XP_005257653 Length = 1242 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IR+++QR++ Sbjct: 737 IREIIQRVE 745>XP_005257652 Length = 1279 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 IRDMLQRIK 9 IR+++QR++ Sbjct: 737 IREIIQRVE 745>XP_006721412 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 797 QDMVERVK 804>XP_005256317 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 815 QDMVERVK 822>XP_005256316 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 844 QDMVERVK 851>XP_005256315 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 870 QDMVERVK 877>XP_006721411 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDMLQRIK 9 +DM++R+K Sbjct: 890 QDMVERVK 897>XP_005250749 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IRDMLQR 7 +RD+LQR Sbjct: 37 LRDVLQR 43>XP_006716239 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IRDMLQR 7 +RD+LQR Sbjct: 37 LRDVLQR 43>NP_071376 Length = 1299 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IRDMLQRIK 9 ++D+L R+K Sbjct: 105 VQDLLARVK 113Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.343 0.153 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 426,393 Number of extensions: 1187 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |