Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1482 XP_006716142 18 1482 XP_005250088 18 1482 XP_006716141 18 1482 XP_005250085 18 1482 XP_006716140 18 1482 XP_005250084 18 1482 XP_005250083 18 1482 XP_005250082 18 1482 NP_056261 18 1935 XP_006711822 18 1935 XP_006711821 18 1935 NP_065883 17 4312 NP_060718 17 4312 XP_005245423 17 4312 XP_005245425 17 4312 NP_001034484 16 5631 NP_001271254 16 5631 NP_001181 16 5631 NP_001158245 16 5631 NP_078836 16 5631 XP_005269208 16 5631 XP_005269207 16 5631 XP_005251556 16 5631 XP_006716862 16 5631 XP_006716861 16 5631 XP_006716860 16 5631 XP_006716859 16 5631 XP_006716858 16 5631 NP_775960 16 7355 XP_005251991 16 7355 NP_001243643 15 9605 NP_002151 15 9605 NP_001164434 15 9605 NP_570123 15 9605 NP_991402 15 9605 XP_006717164 15 9605 XP_005252030 15 9605 XP_006717163 15 9605 XP_006717162 15 9605 XP_006717161 15 9605 XP_006717160 15 9605 XP_005252029 15 9605 XP_006717159 15 9605 XP_006714594 15 9605>NP_733751 Length = 4911 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 I AVVLPGV Sbjct: 916 IGAVVLPGV 924>XP_006716142 Length = 4927 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 I AVVLPGV Sbjct: 917 IGAVVLPGV 925>XP_005250088 Length = 4928 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 I AVVLPGV Sbjct: 917 IGAVVLPGV 925>XP_006716141 Length = 4959 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 I AVVLPGV Sbjct: 917 IGAVVLPGV 925>XP_005250085 Length = 4979 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 I AVVLPGV Sbjct: 917 IGAVVLPGV 925>XP_006716140 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 I AVVLPGV Sbjct: 917 IGAVVLPGV 925>XP_005250084 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 I AVVLPGV Sbjct: 917 IGAVVLPGV 925>XP_005250083 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 I AVVLPGV Sbjct: 916 IGAVVLPGV 924>XP_005250082 Length = 4983 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 I AVVLPGV Sbjct: 917 IGAVVLPGV 925>NP_056261 Length = 2275 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IRAVVLPG 8 ++AVVLPG Sbjct: 126 VKAVVLPG 133>XP_006711822 Length = 2266 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IRAVVLPG 8 ++AVVLPG Sbjct: 117 VKAVVLPG 124>XP_006711821 Length = 2301 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IRAVVLPG 8 ++AVVLPG Sbjct: 152 VKAVVLPG 159>NP_065883 Length = 1237 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RAVVLPG 8 +AVVLPG Sbjct: 422 KAVVLPG 428>NP_060718 Length = 605 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 IRAVVLPG 8 IRA VLPG Sbjct: 14 IRARVLPG 21>XP_005245423 Length = 1246 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RAVVLPG 8 +AVVLPG Sbjct: 431 KAVVLPG 437>XP_005245425 Length = 1299 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RAVVLPG 8 +AVVLPG Sbjct: 484 KAVVLPG 490>NP_001034484 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRAVVLPGV 9 IRA+ PGV Sbjct: 11 IRAISCPGV 19>NP_001271254 Length = 352 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRAVVLPGV 9 + V+LPGV Sbjct: 248 LNGVILPGV 256>NP_001181 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRAVVLPGV 9 + V+LPGV Sbjct: 288 LNGVILPGV 296>NP_001158245 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IRAVVLPGV 9 + V+LPGV Sbjct: 196 LNGVILPGV 204>NP_078836 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IRAVVLPG 8 +RA+V+PG Sbjct: 34 LRALVVPG 41>XP_005269208 Length = 455 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IRAVVLPG 8 +RA+V+PG Sbjct: 34 LRALVVPG 41>XP_005269207 Length = 685 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IRAVVLPG 8 +RA+V+PG Sbjct: 34 LRALVVPG 41>XP_005251556 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRAVVLPGV 9 IRA+ PGV Sbjct: 11 IRAISCPGV 19>XP_006716862 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRAVVLPGV 9 IRA+ PGV Sbjct: 11 IRAISCPGV 19>XP_006716861 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRAVVLPGV 9 IRA+ PGV Sbjct: 11 IRAISCPGV 19>XP_006716860 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRAVVLPGV 9 IRA+ PGV Sbjct: 11 IRAISCPGV 19>XP_006716859 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRAVVLPGV 9 IRA+ PGV Sbjct: 11 IRAISCPGV 19>XP_006716858 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IRAVVLPGV 9 IRA+ PGV Sbjct: 11 IRAISCPGV 19>NP_775960 Length = 1285 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AVVLPG 8 AVVLPG Sbjct: 714 AVVLPG 719>XP_005251991 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AVVLPG 8 AVVLPG Sbjct: 382 AVVLPG 387>NP_001243643 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AVVLPG 8 AV+LPG Sbjct: 92 AVILPG 97>NP_002151 Length = 2201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1126 LRAVDIPGL 1134Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1399 LRAVDIPGL 1407>NP_001164434 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 AVVLPGV 9 A+V+PG+ Sbjct: 233 AIVVPGI 239>NP_570123 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +++V+LP V Sbjct: 471 VKSVILPSV 479>NP_991402 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 AVVLPGV 9 A+V+PG+ Sbjct: 233 AIVVPGI 239>XP_006717164 Length = 1655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1126 LRAVDIPGL 1134>XP_005252030 Length = 1837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1126 LRAVDIPGL 1134>XP_006717163 Length = 1928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1126 LRAVDIPGL 1134Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1399 LRAVDIPGL 1407>XP_006717162 Length = 1928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1126 LRAVDIPGL 1134>XP_006717161 Length = 2019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1126 LRAVDIPGL 1134Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1308 LRAVDIPGL 1316>XP_006717160 Length = 2110 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1126 LRAVDIPGL 1134Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1308 LRAVDIPGL 1316>XP_005252029 Length = 2110 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1126 LRAVDIPGL 1134Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1399 LRAVDIPGL 1407>XP_006717159 Length = 2293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1126 LRAVDIPGL 1134Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +RAV +PG+ Sbjct: 1399 LRAVDIPGL 1407>XP_006714594 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IRAVVLPGV 9 +++V+LP V Sbjct: 443 VKSVILPSV 451Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.154 0.442 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 686,354 Number of extensions: 692 Number of successful extensions: 51 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |