Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 18 1935 NP_444254 18 1935 NP_444253 18 1935 NP_444255 18 1935 XP_005247551 18 1935 XP_005247550 18 1935 XP_006713712 18 1935 XP_005247549 18 1935 NP_003417 16 5631 NP_001243453 16 5631 NP_001243454 16 5631 NP_689691 16 5631 NP_653295 16 5631 XP_005258624 16 5631 XP_005258622 16 5631 XP_005258616 16 5631 XP_005258615 16 5631 NP_001153332 16 5631 NP_001153333 16 5631 NP_057409 16 7355 NP_598009 16 7355 NP_001265663 16 7355 NP_057408 16 7355 NP_001265539 16 7355 NP_002457 16 7355 NP_002709 15 9605 NP_001103132 15 9605 NP_689697 15 9605 NP_061122 15 9605 NP_872579 15 9605 XP_005258621 15 9605 XP_006723112 15 9605 XP_006723111 15 9605 XP_006723110 15 9605 XP_006723109 15 9605 XP_005257215 15 9605 XP_005257214 15 9605 XP_005257213 15 9605 XP_005257212 15 9605 XP_006721834 15 9605 XP_005257211 15 9605 XP_005257210 15 9605 XP_005257209 15 9605 XP_005257208 15 9605 XP_006721833 15 9605 XP_005257207 15 9605 XP_006720668 15 9605 XP_006720667 15 9605 XP_006713749 15 9605 NP_001033729 15 9605>NP_444256 Length = 1794 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 I+SSSLTLS Sbjct: 1274 IRSSSLTLS 1282>NP_444254 Length = 1845 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 I+SSSLTLS Sbjct: 1274 IRSSSLTLS 1282>NP_444253 Length = 1914 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 I+SSSLTLS Sbjct: 1343 IRSSSLTLS 1351>NP_444255 Length = 1863 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 I+SSSLTLS Sbjct: 1343 IRSSSLTLS 1351>XP_005247551 Length = 1855 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 I+SSSLTLS Sbjct: 1284 IRSSSLTLS 1292>XP_005247550 Length = 1856 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 I+SSSLTLS Sbjct: 1353 IRSSSLTLS 1361>XP_006713712 Length = 1923 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 I+SSSLTLS Sbjct: 1353 IRSSSLTLS 1361>XP_005247549 Length = 1924 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 I+SSSLTLS Sbjct: 1353 IRSSSLTLS 1361>NP_003417 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLTL Sbjct: 259 QSSSLTL 265>NP_001243453 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLTL Sbjct: 259 QSSSLTL 265>NP_001243454 Length = 573 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLTL Sbjct: 188 QSSSLTL 194>NP_689691 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLTL Sbjct: 223 QSSSLTL 229>NP_653295 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLTL Sbjct: 229 QSSSLTL 235>XP_005258624 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLTL Sbjct: 26 QSSSLTL 32>XP_005258622 Length = 592 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLTL Sbjct: 285 QSSSLTL 291>XP_005258616 Length = 526 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLTL Sbjct: 180 QSSSLTL 186>XP_005258615 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLTL Sbjct: 224 QSSSLTL 230>NP_001153332 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLTL Sbjct: 223 QSSSLTL 229>NP_001153333 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLTL Sbjct: 223 QSSSLTL 229>NP_057409 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IQSSSLT 7 +QSSSLT Sbjct: 513 VQSSSLT 519>NP_598009 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IQSSSLT 7 +QSSSLT Sbjct: 545 VQSSSLT 551>NP_001265663 Length = 611 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IQSSSLT 7 +QSSSLT Sbjct: 503 VQSSSLT 509>NP_057408 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IQSSSLT 7 +QSSSLT Sbjct: 440 VQSSSLT 446>NP_001265539 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 SSSLTLS 9 SSSLTLS Sbjct: 592 SSSLTLS 598>NP_002457 Length = 700 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 SSSLTLS 9 SSSLTLS Sbjct: 616 SSSLTLS 622>NP_002709 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QS SLT++ Sbjct: 393 VQSQSLTMN 401>NP_001103132 Length = 4284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IQSSSLTL 8 +QSSSL+L Sbjct: 3950 LQSSSLSL 3957>NP_689697 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLT+ Sbjct: 617 QSSSLTI 623>NP_061122 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 ++SSS+T+S Sbjct: 78 LESSSVTIS 86>NP_872579 Length = 2920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2397 VQSSTQTLS 2405>XP_005258621 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLT+ Sbjct: 458 QSSSLTI 464>XP_006723112 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLT+ Sbjct: 617 QSSSLTI 623>XP_006723111 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLT+ Sbjct: 641 QSSSLTI 647>XP_006723110 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLT+ Sbjct: 641 QSSSLTI 647>XP_006723109 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSSSLTL 8 QSSSLT+ Sbjct: 641 QSSSLTI 647>XP_005257215 Length = 3032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2451 VQSSTQTLS 2459>XP_005257214 Length = 3094 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2513 VQSSTQTLS 2521>XP_005257213 Length = 3095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2514 VQSSTQTLS 2522>XP_005257212 Length = 3095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2514 VQSSTQTLS 2522>XP_006721834 Length = 3100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2577 VQSSTQTLS 2585>XP_005257211 Length = 3100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2577 VQSSTQTLS 2585>XP_005257210 Length = 3104 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2523 VQSSTQTLS 2531>XP_005257209 Length = 3148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2577 VQSSTQTLS 2585>XP_005257208 Length = 3157 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2576 VQSSTQTLS 2584>XP_006721833 Length = 3158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2577 VQSSTQTLS 2585>XP_005257207 Length = 3158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QSS+ TLS Sbjct: 2577 VQSSTQTLS 2585>XP_006720668 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 ++SSS+T+S Sbjct: 78 LESSSVTIS 86>XP_006720667 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 ++SSS+T+S Sbjct: 78 LESSSVTIS 86>XP_006713749 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQSSSLTLS 9 +QS SLT++ Sbjct: 393 VQSQSLTMN 401>NP_001033729 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IQSSSLTLS 9 ++SSS+T+S Sbjct: 78 LESSSVTIS 86Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.105 0.214 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 288,891 Number of extensions: 350 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |