Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 18 1135 NP_071347 16 5631 XP_006713348 16 5631 NP_663735 16 7355 NP_113611 16 7355 NP_071428 16 7355 NP_001253967 16 7355 XP_006714731 16 7355 NP_899200 15 9605 NP_001268735 15 9605 NP_001186571 15 9605 NP_001007123 15 9605 NP_001268734 15 9605 NP_056085 15 9605 XP_005272487 15 9605 XP_005272486 15 9605 XP_005272483 15 9605 XP_005272482 15 9605 XP_006719276 15 9605 XP_006719275 15 9605 XP_006719274 15 9605 XP_006719273 15 9605 XP_005268662 15 9605 XP_006719272 15 9605 XP_006713547 15 9605 XP_006713546 15 9605 XP_005247135 15 9605 XP_005247134 15 9605 NP_066193 15 9605>NP_000312 Length = 928 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IQQLMMSLN 9 IQQLMM LN Sbjct: 382 IQQLMMILN 390>NP_071347 Length = 1314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IQQLMMSL 8 ++QLMMSL Sbjct: 378 LKQLMMSL 385>XP_006713348 Length = 1314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 IQQLMMSL 8 ++QLMMSL Sbjct: 378 LKQLMMSL 385>NP_663735 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IQQLMMSLN 9 IQ+L SLN Sbjct: 187 IQELQQSLN 195>NP_113611 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IQQLMMSLN 9 IQ+L SLN Sbjct: 187 IQELQQSLN 195>NP_071428 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QQLMMSLN 9 QQ+M SLN Sbjct: 133 QQIMESLN 140>NP_001253967 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QQLMMSLN 9 QQ+M SLN Sbjct: 133 QQIMESLN 140>XP_006714731 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QQLMMSLN 9 QQ+M SLN Sbjct: 133 QQIMESLN 140>NP_899200 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 488 QELVMTLN 495>NP_001268735 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQQLMMSLN 9 ++QLM S+N Sbjct: 359 VEQLMGSIN 367>NP_001186571 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 138 QELVMTLN 145>NP_001007123 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQQLMMSLN 9 ++QLM S+N Sbjct: 359 VEQLMGSIN 367>NP_001268734 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQQLMMSLN 9 ++QLM S+N Sbjct: 359 VEQLMGSIN 367>NP_056085 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 398 QELVMTLN 405>XP_005272487 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQQLMMSLN 9 ++QLM S+N Sbjct: 359 VEQLMGSIN 367>XP_005272486 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQQLMMSLN 9 ++QLM S+N Sbjct: 359 VEQLMGSIN 367>XP_005272483 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQQLMMSLN 9 ++QLM S+N Sbjct: 359 VEQLMGSIN 367>XP_005272482 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQQLMMSLN 9 ++QLM S+N Sbjct: 359 VEQLMGSIN 367>XP_006719276 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 430 QELVMTLN 437>XP_006719275 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 430 QELVMTLN 437>XP_006719274 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 430 QELVMTLN 437>XP_006719273 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 398 QELVMTLN 405>XP_005268662 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 398 QELVMTLN 405>XP_006719272 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 430 QELVMTLN 437>XP_006713547 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 47 QELVMTLN 54>XP_006713546 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 121 QELVMTLN 128>XP_005247135 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 138 QELVMTLN 145>XP_005247134 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 488 QELVMTLN 495>NP_066193 Length = 1115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQLMMSLN 9 Q+L+M+LN Sbjct: 398 QELVMTLN 405Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.131 0.310 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 277,757 Number of extensions: 414 Number of successful extensions: 29 Number of sequences better than 10000.0: 29 Number of HSP's gapped: 29 Number of HSP's successfully gapped: 29 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |