Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001264671 19 869 NP_063938 19 869 XP_005264490 19 869 NP_005912 18 1935 XP_005248577 18 1935 XP_005248576 18 1935 NP_005674 16 5631 NP_000410 16 5631 NP_690875 16 5631 NP_997011 16 5631 XP_005247009 16 5631 NP_073751 16 7355 NP_891549 16 7355 NP_009149 16 7355 XP_005258190 16 7355 XP_005258189 16 7355 XP_006722402 16 7355 NP_001167579 16 7355 NP_055213 15 9605 NP_005948 15 9605 NP_056994 15 9605 NP_060334 15 9605 XP_005251701 15 9605 XP_005251699 15 9605 XP_005251698 15 9605 XP_005251697 15 9605 XP_006716666 15 9605 XP_006716665 15 9605 XP_006713649 15 9605 XP_005247417 15 9605 XP_005264407 15 9605 XP_005264406 15 9605 XP_005264405 15 9605 XP_005263520 15 9605 XP_005263519 15 9605 XP_005263518 15 9605 XP_005263517 15 9605 XP_005263515 15 9605 NP_839943 15 9605>NP_001264671 Length = 437 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 IQLVVEDTL 9 IQLV++DTL Sbjct: 86 IQLVIQDTL 94>NP_063938 Length = 512 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 IQLVVEDTL 9 IQLV++DTL Sbjct: 161 IQLVIQDTL 169>XP_005264490 Length = 454 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 IQLVVEDTL 9 IQLV++DTL Sbjct: 103 IQLVIQDTL 111>NP_005912 Length = 1512 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IQLVVEDTL 9 IQL VEDTL Sbjct: 869 IQLGVEDTL 877>XP_005248577 Length = 1349 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IQLVVEDTL 9 IQL VEDTL Sbjct: 706 IQLGVEDTL 714>XP_005248576 Length = 1375 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IQLVVEDTL 9 IQL VEDTL Sbjct: 732 IQLGVEDTL 740>NP_005674 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IQLVVEDT 8 +QLV++DT Sbjct: 307 VQLVLQDT 314>NP_000410 Length = 1039 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 IQLVVEDTL 9 +QL+V+D+L Sbjct: 489 VQLLVQDSL 497>NP_690875 Length = 511 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 IQLVVEDT 8 IQLV EDT Sbjct: 339 IQLVWEDT 346>NP_997011 Length = 486 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 IQLVVEDT 8 IQLV EDT Sbjct: 339 IQLVWEDT 346>XP_005247009 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IQLVVEDT 8 +QLV++DT Sbjct: 307 VQLVLQDT 314>NP_073751 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IQLVVEDT 8 +QLV EDT Sbjct: 219 LQLVEEDT 226>NP_891549 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IQLVVEDT 8 +QL VEDT Sbjct: 334 LQLSVEDT 341>NP_009149 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IQLVVEDT 8 +QL++EDT Sbjct: 221 LQLLMEDT 228>XP_005258190 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IQLVVEDT 8 +QLV EDT Sbjct: 72 LQLVEEDT 79>XP_005258189 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IQLVVEDT 8 +QLV EDT Sbjct: 219 LQLVEEDT 226>XP_006722402 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IQLVVEDT 8 +QLV EDT Sbjct: 219 LQLVEEDT 226>NP_001167579 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IQLVVED 7 IQ++VED Sbjct: 415 IQMIVED 421>NP_055213 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IQLVVED 7 IQL+V+D Sbjct: 244 IQLIVQD 250>NP_005948 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVEDTL 9 VVEDTL Sbjct: 635 VVEDTL 640>NP_056994 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IQLVVEDTL 9 IQL+ ED L Sbjct: 413 IQLLAEDRL 421>NP_060334 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IQLVVEDTL 9 IQ+ +ED L Sbjct: 342 IQIFIEDNL 350>XP_005251701 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQLVVEDTL 9 +Q +VEDT+ Sbjct: 1 MQEIVEDTM 9>XP_005251699 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQLVVEDTL 9 +Q +VEDT+ Sbjct: 1 MQEIVEDTM 9>XP_005251698 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQLVVEDTL 9 +Q +VEDT+ Sbjct: 1 MQEIVEDTM 9>XP_005251697 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IQLVVEDTL 9 +Q +VEDT+ Sbjct: 1 MQEIVEDTM 9>XP_006716666 Length = 886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IQLVVEDTL 9 IQ+ +ED L Sbjct: 233 IQIFIEDNL 241>XP_006716665 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IQLVVEDTL 9 IQ+ +ED L Sbjct: 290 IQIFIEDNL 298>XP_006713649 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IQLVVED 7 IQL+V+D Sbjct: 220 IQLIVQD 226>XP_005247417 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IQLVVED 7 IQL+V+D Sbjct: 244 IQLIVQD 250>XP_005264407 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IQLVVEDTL 9 IQL+ ED L Sbjct: 254 IQLLAEDRL 262>XP_005264406 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IQLVVEDTL 9 IQL+ ED L Sbjct: 266 IQLLAEDRL 274>XP_005264405 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IQLVVEDTL 9 IQL+ ED L Sbjct: 413 IQLLAEDRL 421>XP_005263520 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVEDTL 9 VVEDTL Sbjct: 553 VVEDTL 558>XP_005263519 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVEDTL 9 VVEDTL Sbjct: 635 VVEDTL 640>XP_005263518 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVEDTL 9 VVEDTL Sbjct: 635 VVEDTL 640>XP_005263517 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVEDTL 9 VVEDTL Sbjct: 635 VVEDTL 640>XP_005263515 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVEDTL 9 VVEDTL Sbjct: 676 VVEDTL 681>NP_839943 Length = 1631 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VVEDTL 9 VVEDTL Sbjct: 222 VVEDTL 227Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.143 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 458,814 Number of extensions: 688 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |