Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 18 1135 XP_005273257 18 1135 NP_001193928 17 4312 NP_001154976 17 4312 NP_733844 17 4312 NP_003739 17 4312 NP_009105 17 4312 XP_005253886 17 4312 XP_006719269 17 4312 XP_006726466 16 5631 XP_006712969 16 5631 XP_006710208 16 5631 NP_004689 16 7355 NP_663622 16 7355 XP_005251162 16 7355 XP_005251161 16 7355 XP_005251160 16 7355 XP_005251159 16 7355 NP_001138560 16 7355 NP_004278 15 9605 NP_001012529 15 9605 NP_000032 15 9605 NP_473363 15 9605 NP_003240 15 9605 XP_005258924 15 9605 XP_005257902 15 9605 XP_005257901 15 9605 XP_006722255 15 9605 XP_006722254 15 9605 XP_006722253 15 9605 XP_006722252 15 9605 XP_006722251 15 9605 XP_005257900 15 9605>NP_064450 Length = 1722 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IQAKIDQAA 9 IQAKIDQ A Sbjct: 1618 IQAKIDQEA 1626>XP_005273257 Length = 1726 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IQAKIDQAA 9 IQAKIDQ A Sbjct: 1622 IQAKIDQEA 1630>NP_001193928 Length = 2069 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQAKIDQAA 9 +QAK+DQ A Sbjct: 1268 LQAKMDQPA 1276>NP_001154976 Length = 503 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IQAKIDQAA 9 IQA+ID AA Sbjct: 96 IQAEIDAAA 104>NP_733844 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IQAKIDQAA 9 IQA+ID AA Sbjct: 156 IQAEIDAAA 164>NP_003739 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IQAKIDQAA 9 IQA+ID AA Sbjct: 156 IQAEIDAAA 164>NP_009105 Length = 2027 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQAKIDQAA 9 +QAK+DQ A Sbjct: 1226 LQAKMDQPA 1234>XP_005253886 Length = 1545 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQAKIDQAA 9 +QAK+DQ A Sbjct: 760 LQAKMDQPA 768>XP_006719269 Length = 2054 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQAKIDQAA 9 +QAK+DQ A Sbjct: 1268 LQAKMDQPA 1276>XP_006726466 Length = 1310 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IQAKIDQA 8 +QA++DQA Sbjct: 868 LQARLDQA 875>XP_006712969 Length = 1310 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IQAKIDQA 8 +QA++DQA Sbjct: 868 LQARLDQA 875>XP_006710208 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 IQAKIDQA 8 +QA++DQA Sbjct: 224 LQARLDQA 231>NP_004689 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 IQAKIDQAA 9 +QA+I QAA Sbjct: 351 LQAEISQAA 359>NP_663622 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IQAKIDQ 7 +QAK+DQ Sbjct: 712 MQAKVDQ 718>XP_005251162 Length = 961 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IQAKIDQ 7 +QAK+DQ Sbjct: 607 MQAKVDQ 613>XP_005251161 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IQAKIDQ 7 +QAK+DQ Sbjct: 633 MQAKVDQ 639>XP_005251160 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IQAKIDQ 7 +QAK+DQ Sbjct: 712 MQAKVDQ 718>XP_005251159 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IQAKIDQ 7 +QAK+DQ Sbjct: 712 MQAKVDQ 718>NP_001138560 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 IQAKIDQ 7 +QAK+DQ Sbjct: 712 MQAKVDQ 718>NP_004278 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IQAKIDQ 7 IQA IDQ Sbjct: 37 IQASIDQ 43>NP_001012529 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IQAKIDQ 7 IQA IDQ Sbjct: 37 IQASIDQ 43>NP_000032 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QAKIDQA 8 QAK++QA Sbjct: 17 QAKVEQA 23>NP_473363 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IQAKIDQ 7 IQA IDQ Sbjct: 37 IQASIDQ 43>NP_003240 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IQAKIDQA 8 + AK+DQA Sbjct: 556 VLAKVDQA 563>XP_005258924 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QAKIDQA 8 QAK++QA Sbjct: 43 QAKVEQA 49>XP_005257902 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IQAKIDQ 7 IQA IDQ Sbjct: 19 IQASIDQ 25>XP_005257901 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IQAKIDQ 7 IQA IDQ Sbjct: 37 IQASIDQ 43>XP_006722255 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IQAKIDQ 7 IQA IDQ Sbjct: 37 IQASIDQ 43>XP_006722254 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IQAKIDQ 7 IQA IDQ Sbjct: 37 IQASIDQ 43>XP_006722253 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IQAKIDQ 7 IQA IDQ Sbjct: 37 IQASIDQ 43>XP_006722252 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IQAKIDQ 7 IQA IDQ Sbjct: 37 IQASIDQ 43>XP_006722251 Length = 239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IQAKIDQ 7 IQA IDQ Sbjct: 19 IQASIDQ 25>XP_005257900 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IQAKIDQ 7 IQA IDQ Sbjct: 37 IQASIDQ 43Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.122 0.287 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 299,387 Number of extensions: 470 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |