Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001276866 18 1482 NP_004439 18 1482 NP_001276865 18 1482 NP_001005862 18 1482 XP_005257197 18 1482 XP_006721828 18 1482 NP_001036064 17 4312 NP_005226 17 4312 NP_001787 17 4312 XP_005255817 17 4312 XP_005255816 17 4312 XP_005246434 17 4312 XP_005246433 17 4312 XP_005246432 17 4312 XP_006712427 17 4312 NP_543013 16 5631 XP_006711596 16 5631 NP_110391 16 5631 NP_005219 16 7355 NP_001259004 15 9605 NP_005144 15 9605 NP_004583 15 9605 NP_001248340 15 9605 NP_689862 15 9605 NP_775926 15 9605 NP_001265229 15 9605 NP_001973 15 9605 NP_001073917 15 9605 NP_079123 15 9605 NP_001153836 15 9605 NP_001257420 15 9605 NP_036555 15 9605 XP_006721395 15 9605 XP_006721394 15 9605 XP_006721393 15 9605 XP_005255891 15 9605 XP_005255657 15 9605 XP_006721158 15 9605 XP_006721157 15 9605 XP_005255654 15 9605 XP_006719622 15 9605 XP_006719621 15 9605 XP_006713657 15 9605 XP_006713656 15 9605 XP_006713655 15 9605>NP_001276866 Length = 1055 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IPVAIKVSR 9 IPVAIKV R Sbjct: 748 IPVAIKVLR 756>NP_004439 Length = 1255 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IPVAIKVSR 9 IPVAIKV R Sbjct: 748 IPVAIKVLR 756>NP_001276865 Length = 1240 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IPVAIKVSR 9 IPVAIKV R Sbjct: 733 IPVAIKVLR 741>NP_001005862 Length = 1225 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IPVAIKVSR 9 IPVAIKV R Sbjct: 718 IPVAIKVLR 726>XP_005257197 Length = 1225 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IPVAIKVSR 9 IPVAIKV R Sbjct: 718 IPVAIKVLR 726>XP_006721828 Length = 1336 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IPVAIKVSR 9 IPVAIKV R Sbjct: 829 IPVAIKVLR 837>NP_001036064 Length = 1292 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPVAIKV 7 IPVAIK+ Sbjct: 746 IPVAIKI 752>NP_005226 Length = 1308 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPVAIKV 7 IPVAIK+ Sbjct: 746 IPVAIKI 752>NP_001787 Length = 799 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPVAIKV 7 +PVAIKV Sbjct: 480 VPVAIKV 486>XP_005255817 Length = 711 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPVAIKV 7 +PVAIKV Sbjct: 480 VPVAIKV 486>XP_005255816 Length = 799 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPVAIKV 7 +PVAIKV Sbjct: 480 VPVAIKV 486>XP_005246434 Length = 1282 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPVAIKV 7 IPVAIK+ Sbjct: 736 IPVAIKI 742>XP_005246433 Length = 1298 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPVAIKV 7 IPVAIK+ Sbjct: 736 IPVAIKI 742>XP_005246432 Length = 1307 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPVAIKV 7 IPVAIK+ Sbjct: 761 IPVAIKI 767>XP_006712427 Length = 1323 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPVAIKV 7 IPVAIK+ Sbjct: 761 IPVAIKI 767>NP_543013 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 IPVAIKV 7 +PVAIKV Sbjct: 253 LPVAIKV 259>XP_006711596 Length = 413 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 IPV I VSR Sbjct: 196 IPVRIPVSR 204>NP_110391 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 IPV I VSR Sbjct: 291 IPVRIPVSR 299>NP_005219 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 IPVAIK R Sbjct: 740 IPVAIKELR 748>NP_001259004 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PVAIKVS 8 PVAIK++ Sbjct: 395 PVAIKIA 401>NP_005144 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PVAIKVS 8 PVAIK++ Sbjct: 391 PVAIKIA 397>NP_004583 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 +P A +VSR Sbjct: 825 VPTAYRVSR 833>NP_001248340 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 +P A +VSR Sbjct: 877 VPTAYRVSR 885>NP_689862 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PVAIKV 7 PVAIKV Sbjct: 226 PVAIKV 231>NP_775926 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IPVAIK 6 IPVAIK Sbjct: 144 IPVAIK 149>NP_001265229 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IPVAIK 6 IPVAIK Sbjct: 144 IPVAIK 149>NP_001973 Length = 1342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 IPVAIKV 7 IPV IKV Sbjct: 737 IPVCIKV 743>NP_001073917 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IPVAIK 6 IPVAIK Sbjct: 752 IPVAIK 757>NP_079123 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 IP+ I +SR Sbjct: 616 IPLTISISR 624>NP_001153836 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 IP+ I +SR Sbjct: 506 IPLTISISR 514>NP_001257420 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 +P A+KV R Sbjct: 59 VPAALKVVR 67>NP_036555 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 +P A+KV R Sbjct: 120 VPAALKVVR 128>XP_006721395 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PVAIKVS 8 PVAIK++ Sbjct: 195 PVAIKIA 201>XP_006721394 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PVAIKVS 8 PVAIK++ Sbjct: 396 PVAIKIA 402>XP_006721393 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PVAIKVS 8 PVAIK++ Sbjct: 396 PVAIKIA 402>XP_005255891 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 PVAIKV 7 PVAIKV Sbjct: 226 PVAIKV 231>XP_005255657 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 IP+ I +SR Sbjct: 274 IPLTISISR 282>XP_006721158 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 IP+ I +SR Sbjct: 518 IPLTISISR 526>XP_006721157 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 IP+ I +SR Sbjct: 616 IPLTISISR 624>XP_005255654 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 IP+ I +SR Sbjct: 616 IPLTISISR 624>XP_006719622 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 +P A +VSR Sbjct: 699 VPTAYRVSR 707>XP_006719621 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPVAIKVSR 9 +P A +VSR Sbjct: 748 VPTAYRVSR 756>XP_006713657 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IPVAIK 6 IPVAIK Sbjct: 118 IPVAIK 123>XP_006713656 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IPVAIK 6 IPVAIK Sbjct: 118 IPVAIK 123>XP_006713655 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 IPVAIK 6 IPVAIK Sbjct: 768 IPVAIK 773Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.140 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 395,925 Number of extensions: 461 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |