Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 18 1482 NP_001087241 18 1482 XP_005265799 18 1482 XP_005265798 18 1482 XP_005265797 18 1482 NP_653310 17 2528 XP_006712015 17 2528 NP_996816 17 4312 NP_001091681 16 5631 NP_001091683 16 5631 NP_001091682 16 5631 NP_000852 16 5631 NP_068370 16 7355 NP_005494 16 7355 NP_001123886 16 7355 NP_006071 16 7355 NP_001154 16 7355 NP_001265043 16 7355 NP_001265042 16 7355 NP_001455 16 7355 XP_006725606 16 7355 XP_005254388 16 7355 XP_006725182 16 7355 XP_006720544 16 7355 XP_006720543 16 7355 XP_005252025 16 7355 XP_005252024 16 7355 XP_006717156 16 7355 XP_005273525 16 7355 XP_006715902 16 7355 XP_006715901 16 7355 XP_005250168 16 7355 XP_005250167 16 7355 XP_006710441 16 7355 XP_005270554 16 7355 NP_002026 15 9605 NP_001631 15 9605 XP_006723172 15 9605 XP_006723171 15 9605 XP_006723167 15 9605 XP_006723166 15 9605 XP_006723165 15 9605 XP_006723164 15 9605 XP_006723163 15 9605 XP_006723162 15 9605 XP_006723161 15 9605 XP_005266734 15 9605 XP_006722496 15 9605 XP_005265155 15 9605 XP_005265154 15 9605 NP_060689 15 9605>NP_000213 Length = 976 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 INYVGSTAS 9 IN VGSTAS Sbjct: 957 INSVGSTAS 965>NP_001087241 Length = 972 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 INYVGSTAS 9 IN VGSTAS Sbjct: 953 INSVGSTAS 961>XP_005265799 Length = 973 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 INYVGSTAS 9 IN VGSTAS Sbjct: 954 INSVGSTAS 962>XP_005265798 Length = 976 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 INYVGSTAS 9 IN VGSTAS Sbjct: 957 INSVGSTAS 965>XP_005265797 Length = 977 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 INYVGSTAS 9 IN VGSTAS Sbjct: 958 INSVGSTAS 966>NP_653310 Length = 529 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 INYVGSTAS 9 +++VGSTAS Sbjct: 93 VSHVGSTAS 101>XP_006712015 Length = 529 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 INYVGSTAS 9 +++VGSTAS Sbjct: 93 VSHVGSTAS 101>NP_996816 Length = 5202 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 NYVGSTAS 9 N VGSTAS Sbjct: 4913 NEVGSTAS 4920>NP_001091681 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INYVGSTAS 9 ++YV STAS Sbjct: 106 MDYVASTAS 114>NP_001091683 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INYVGSTAS 9 ++YV STAS Sbjct: 106 MDYVASTAS 114>NP_001091682 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INYVGSTAS 9 ++YV STAS Sbjct: 106 MDYVASTAS 114>NP_000852 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INYVGSTAS 9 ++YV STAS Sbjct: 106 MDYVASTAS 114>NP_068370 Length = 614 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INYVGSTAS 9 I Y+GS+ S Sbjct: 14 ITYIGSSGS 22>NP_005494 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NY+GST Sbjct: 375 NYLGST 380>NP_001123886 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NY+GST Sbjct: 375 NYLGST 380>NP_006071 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YVGSTA 8 Y+GSTA Sbjct: 502 YIGSTA 507>NP_001154 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NY+GST Sbjct: 464 NYLGST 469>NP_001265043 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NYVG+T Sbjct: 276 NYVGAT 281>NP_001265042 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NYVG+T Sbjct: 257 NYVGAT 262>NP_001455 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NYVG+T Sbjct: 276 NYVGAT 281>XP_006725606 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NY+GST Sbjct: 375 NYLGST 380>XP_005254388 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NY+GST Sbjct: 375 NYLGST 380>XP_006725182 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NYVG+T Sbjct: 276 NYVGAT 281>XP_006720544 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NY+GST Sbjct: 375 NYLGST 380>XP_006720543 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NY+GST Sbjct: 375 NYLGST 380>XP_005252025 Length = 826 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NY+GST Sbjct: 464 NYLGST 469>XP_005252024 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NY+GST Sbjct: 464 NYLGST 469>XP_006717156 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NY+GST Sbjct: 464 NYLGST 469>XP_005273525 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 NYVG+T Sbjct: 276 NYVGAT 281>XP_006715902 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YVGSTA 8 Y+GSTA Sbjct: 502 YIGSTA 507>XP_006715901 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YVGSTA 8 Y+GSTA Sbjct: 502 YIGSTA 507>XP_005250168 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YVGSTA 8 Y+GSTA Sbjct: 502 YIGSTA 507>XP_005250167 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YVGSTA 8 Y+GSTA Sbjct: 502 YIGSTA 507>XP_006710441 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 INYVGSTAS 9 +N+ GST+S Sbjct: 64 LNFPGSTSS 72>XP_005270554 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 INYVGSTAS 9 +N+ GST+S Sbjct: 64 LNFPGSTSS 72>NP_002026 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 INYVGS 6 INY+GS Sbjct: 144 INYLGS 149>NP_001631 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY GST Sbjct: 535 VNYRGST 541>XP_006723172 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY+G T Sbjct: 17 VNYLGGT 23>XP_006723171 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY+G T Sbjct: 41 VNYLGGT 47>XP_006723167 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY+G T Sbjct: 17 VNYLGGT 23>XP_006723166 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY+G T Sbjct: 17 VNYLGGT 23>XP_006723165 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY+G T Sbjct: 17 VNYLGGT 23>XP_006723164 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY+G T Sbjct: 17 VNYLGGT 23>XP_006723163 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY+G T Sbjct: 41 VNYLGGT 47>XP_006723162 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY+G T Sbjct: 41 VNYLGGT 47>XP_006723161 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY+G T Sbjct: 41 VNYLGGT 47>XP_005266734 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 INYVGS 6 INY+GS Sbjct: 144 INYLGS 149>XP_006722496 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 INYVGS 6 INY+GS Sbjct: 115 INYLGS 120>XP_005265155 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY GST Sbjct: 434 VNYRGST 440>XP_005265154 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INYVGST 7 +NY GST Sbjct: 489 VNYRGST 495>NP_060689 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NYVGST 7 N+VGST Sbjct: 485 NFVGST 490Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.118 0.308 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 489,096 Number of extensions: 460 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |