Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 18 1135 NP_061984 17 4312 NP_002110 17 4312 NP_620140 17 4312 XP_006726149 17 4312 XP_005275597 17 4312 XP_006726059 17 4312 XP_005275440 17 4312 XP_006725969 17 4312 XP_005275300 17 4312 XP_006725878 17 4312 XP_005275163 17 4312 XP_006725760 17 4312 XP_005275008 17 4312 XP_006725546 17 4312 XP_005272861 17 4312 XP_006722987 17 4312 XP_006715139 17 4312 XP_005249104 17 4312 NP_055860 16 5631 XP_005257832 16 5631 XP_006717792 16 5631 XP_006717791 16 5631 XP_006717790 16 5631 XP_006717789 16 5631 NP_219481 16 5631 NP_060139 16 7355 NP_001139281 16 7355 NP_055832 16 7355 NP_001275964 16 7355 NP_001275963 16 7355 NP_443120 16 7355 NP_001070654 16 7355 NP_079005 16 7355 NP_963920 16 7355 NP_963918 16 7355 NP_958930 16 7355 NP_958929 16 7355 NP_958931 16 7355 XP_006723449 16 7355 XP_005270706 16 7355 XP_005270705 16 7355 NP_115495 15 9605 NP_075069 15 9605 NP_001184167 15 9605 NP_003939 15 9605 NP_001035514 15 9605 NP_001269863 15 9605 NP_071398 15 9605 XP_006724103 15 9605 XP_006724102 15 9605 XP_006718731 15 9605 XP_006718730 15 9605 XP_006714470 15 9605 XP_006714469 15 9605 XP_005263392 15 9605>NP_002430 Length = 1137 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 INVTTLRNL 9 IN TTLRNL Sbjct: 537 INGTTLRNL 545>NP_061984 Length = 254 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 +NVT LRN Sbjct: 142 VNVTWLRN 149>NP_002110 Length = 250 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 143 INITWLRN 150>NP_620140 Length = 330 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 INVTTLRN 8 INVTTL++ Sbjct: 45 INVTTLKD 52>XP_006726149 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005275597 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006726059 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005275440 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006725969 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005275300 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006725878 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005275163 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006725760 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005275008 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006725546 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005272861 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006722987 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 INVTTLRNL 9 IN+ LRNL Sbjct: 330 INIMNLRNL 338>XP_006715139 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005249104 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+T LRN Sbjct: 143 INITWLRN 150>NP_055860 Length = 1190 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 INVTTLR 7 INVTT+R Sbjct: 1138 INVTTVR 1144>XP_005257832 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTTLRNL 9 +TT+RNL Sbjct: 65 ITTIRNL 71>XP_006717792 Length = 1184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 INVTTLR 7 INVTT+R Sbjct: 1132 INVTTVR 1138>XP_006717791 Length = 1210 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 INVTTLR 7 INVTT+R Sbjct: 1158 INVTTVR 1164>XP_006717790 Length = 1255 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 INVTTLR 7 INVTT+R Sbjct: 1203 INVTTVR 1209>XP_006717789 Length = 1261 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 INVTTLR 7 INVTT+R Sbjct: 1209 INVTTVR 1215>NP_219481 Length = 321 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VTTLRNL 9 +TT+RNL Sbjct: 56 ITTIRNL 62>NP_060139 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INVTTLRN 8 +NVTTL++ Sbjct: 794 VNVTTLQD 801>NP_001139281 Length = 2036 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VTTLRN 8 VTTLRN Sbjct: 1979 VTTLRN 1984>NP_055832 Length = 942 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 INVTTLR 7 +N+TTLR Sbjct: 105 VNLTTLR 111>NP_001275964 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLRNL 9 TTLRNL Sbjct: 388 TTLRNL 393>NP_001275963 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLRNL 9 TTLRNL Sbjct: 465 TTLRNL 470>NP_443120 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 INVTTLRNL 9 I +TTL+N+ Sbjct: 690 ITLTTLKNI 698>NP_001070654 Length = 2003 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VTTLRN 8 VTTLRN Sbjct: 1946 VTTLRN 1951>NP_079005 Length = 1995 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VTTLRN 8 VTTLRN Sbjct: 1938 VTTLRN 1943>NP_963920 Length = 828 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 INVTTLR 7 +N+TTLR Sbjct: 105 VNLTTLR 111>NP_963918 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 INVTTLR 7 +N+TTLR Sbjct: 74 VNLTTLR 80>NP_958930 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLRNL 9 TTLRNL Sbjct: 465 TTLRNL 470>NP_958929 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLRNL 9 TTLRNL Sbjct: 465 TTLRNL 470>NP_958931 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TTLRNL 9 TTLRNL Sbjct: 483 TTLRNL 488>XP_006723449 Length = 2003 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VTTLRN 8 VTTLRN Sbjct: 1946 VTTLRN 1951>XP_005270706 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 INVTTLR 7 +N+TTLR Sbjct: 105 VNLTTLR 111>XP_005270705 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 INVTTLR 7 +N+TTLR Sbjct: 105 VNLTTLR 111>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 +N+T L+N Sbjct: 876 VNITILKN 883>NP_075069 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VTTLRN 8 +TTLRN Sbjct: 147 ITTLRN 152>NP_001184167 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 +N+T LRN Sbjct: 328 VNLTGLRN 335>NP_003939 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 INVTTL 6 INVTTL Sbjct: 467 INVTTL 472>NP_001035514 Length = 1178 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+TTL N Sbjct: 1116 INLTTLVN 1123>NP_001269863 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+TTL N Sbjct: 1136 INLTTLVN 1143>NP_071398 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+TTL N Sbjct: 1445 INLTTLVN 1452>XP_006724103 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+TTL N Sbjct: 1072 INLTTLVN 1079>XP_006724102 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INVTTLRN 8 IN+TTL N Sbjct: 1092 INLTTLVN 1099>XP_006718731 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VTTLRN 8 +TTLRN Sbjct: 19 ITTLRN 24>XP_006718730 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VTTLRN 8 +TTLRN Sbjct: 32 ITTLRN 37>XP_006714470 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 INVTTL 6 INVTTL Sbjct: 467 INVTTL 472>XP_006714469 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 INVTTL 6 INVTTL Sbjct: 467 INVTTL 472>XP_005263392 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 INVTTL 6 INVTTL Sbjct: 467 INVTTL 472Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.136 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 309,594 Number of extensions: 360 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |