Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 17 3301 NP_001075109 17 3301 NP_036547 17 4312 NP_001192191 17 4312 XP_006726900 17 4312 XP_006724474 17 4312 XP_006710184 17 4312 NP_001186491 16 5631 NP_003551 16 5631 NP_001004426 16 5631 NP_001277140 16 5631 NP_001010855 16 5631 NP_001129631 16 5631 NP_001129630 16 5631 NP_001129629 16 5631 NP_060072 16 5631 XP_005278099 16 5631 XP_005272679 16 5631 XP_006724600 16 5631 XP_005278096 16 5631 XP_005261828 16 5631 XP_006724395 16 5631 XP_005261823 16 5631 XP_005261822 16 5631 XP_005261821 16 5631 NP_001191304 16 7355 NP_000899 16 7355 NP_001191305 16 7355 NP_056079 16 7355 NP_689885 16 7355 NP_001009880 16 7355 NP_689632 16 7355 XP_005273469 16 7355 XP_005273468 16 7355 XP_005273467 16 7355 XP_005273466 16 7355 XP_005248366 16 7355 XP_006713598 16 7355 NP_000543 15 9605 NP_848638 15 9605 NP_055816 15 9605 NP_056121 15 9605 NP_000150 15 9605 NP_004663 15 9605 NP_065933 15 9605 NP_001452 15 9605 NP_001138302 15 9605 NP_001138301 15 9605 NP_002074 15 9605 XP_005277842 15 9605 XP_006713871 15 9605 XP_006713870 15 9605 XP_006711308 15 9605 XP_006711307 15 9605 XP_005273004 15 9605 XP_005273005 15 9605 XP_005273003 15 9605 XP_005246086 15 9605 XP_005270747 15 9605 XP_006710574 15 9605 XP_005270746 15 9605 NP_036525 15 9605 NP_203528 15 9605 NP_005764 15 9605>NP_008835 Length = 4128 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 INTFEG 6 INTFEG Sbjct: 1221 INTFEG 1226>NP_001075109 Length = 4097 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 INTFEG 6 INTFEG Sbjct: 1221 INTFEG 1226>NP_036547 Length = 910 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 I FEGVA+ Sbjct: 41 IKLFEGVAI 49>NP_001192191 Length = 117 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 I FEGVA+ Sbjct: 41 IKLFEGVAI 49>XP_006726900 Length = 258 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INTFEGVAV 9 ++TFEGV V Sbjct: 145 LSTFEGVHV 153>XP_006724474 Length = 278 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INTFEGVAV 9 ++TFEGV V Sbjct: 145 LSTFEGVHV 153>XP_006710184 Length = 258 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INTFEGVAV 9 ++TFEGV V Sbjct: 145 LSTFEGVHV 153>NP_001186491 Length = 752 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 +NTF GV Sbjct: 8 VNTFSGV 14>NP_003551 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 +NTF GV Sbjct: 8 VNTFSGV 14>NP_001004426 Length = 752 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 +NTF GV Sbjct: 8 VNTFSGV 14>NP_001277140 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 610 INTFSGI 616>NP_001010855 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 746 INTFSGI 752>NP_001129631 Length = 349 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 89 INTFHGI 95>NP_001129630 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 306 INTFHGI 312>NP_001129629 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 306 INTFHGI 312>NP_060072 Length = 571 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 311 INTFHGI 317>XP_005278099 Length = 355 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 94 INTFHGI 100>XP_005272679 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 306 INTFHGI 312>XP_006724600 Length = 571 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 311 INTFHGI 317>XP_005278096 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 311 INTFHGI 317>XP_005261828 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 +NTF GV Sbjct: 8 VNTFSGV 14>XP_006724395 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 +NTF GV Sbjct: 8 VNTFSGV 14>XP_005261823 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 +NTF GV Sbjct: 8 VNTFSGV 14>XP_005261822 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 +NTF GV Sbjct: 8 VNTFSGV 14>XP_005261821 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 +NTF GV Sbjct: 8 VNTFSGV 14>NP_001191304 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TFEGVA 8 TFEG+A Sbjct: 396 TFEGIA 401>NP_000899 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TFEGVA 8 TFEG+A Sbjct: 396 TFEGIA 401>NP_001191305 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TFEGVA 8 TFEG+A Sbjct: 180 TFEGIA 185>NP_056079 Length = 409 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTFEGV 7 NTF+GV Sbjct: 201 NTFQGV 206>NP_689885 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INTFEGVA 8 INTF GV+ Sbjct: 221 INTFLGVS 228>NP_001009880 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTFEGV 7 NTF+GV Sbjct: 196 NTFQGV 201>NP_689632 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 INTFEGVAV 9 ++TF G+A+ Sbjct: 243 VDTFRGIAL 251>XP_005273469 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 INTFEGVAV 9 ++TF G+A+ Sbjct: 243 VDTFRGIAL 251>XP_005273468 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 INTFEGVAV 9 ++TF G+A+ Sbjct: 243 VDTFRGIAL 251>XP_005273467 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 INTFEGVAV 9 ++TF G+A+ Sbjct: 243 VDTFRGIAL 251>XP_005273466 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 INTFEGVAV 9 ++TF G+A+ Sbjct: 243 VDTFRGIAL 251>XP_005248366 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TFEGVA 8 TFEG+A Sbjct: 180 TFEGIA 185>XP_006713598 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 INTFEGVA 8 INTF GV+ Sbjct: 105 INTFLGVS 112>NP_000543 Length = 2813 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 INTFEG 6 +NTF+G Sbjct: 43 VNTFDG 48>NP_848638 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TFEGVAV 9 T++GVAV Sbjct: 148 TYQGVAV 154>NP_055816 Length = 3664 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 +NT EGV + Sbjct: 2808 VNTSEGVVL 2816>NP_056121 Length = 2620 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NTFEGV 7 NTF+G+ Sbjct: 1800 NTFQGI 1805>NP_000150 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 INTFEG 6 +NT+EG Sbjct: 410 VNTYEG 415>NP_004663 Length = 1288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 779 INTFSGL 785>NP_065933 Length = 1284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTFEGVAV 9 NTF G+A+ Sbjct: 255 NTFTGLAL 262>NP_001452 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 +N F+GV V Sbjct: 138 MNVFDGVMV 146>NP_001138302 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 +N F+GV V Sbjct: 138 MNVFDGVMV 146>NP_001138301 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 +N F+GV V Sbjct: 138 MNVFDGVMV 146>NP_002074 Length = 190 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NTFEGVAV 9 NTF G AV Sbjct: 24 NTFRGRAV 31>XP_005277842 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TFEGVAV 9 T++GVAV Sbjct: 221 TYQGVAV 227>XP_006713871 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 INTFEGV 7 +NT+EG+ Sbjct: 159 LNTYEGL 165>XP_006713870 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 INTFEGV 7 +NT+EG+ Sbjct: 398 LNTYEGL 404>XP_006711308 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 +N F+GV V Sbjct: 138 MNVFDGVMV 146>XP_006711307 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 +N F+GV V Sbjct: 138 MNVFDGVMV 146>XP_005273004 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 +N F+GV V Sbjct: 138 MNVFDGVMV 146>XP_005273005 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 +N F+GV V Sbjct: 138 MNVFDGVMV 146>XP_005273003 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 +N F+GV V Sbjct: 138 MNVFDGVMV 146>XP_005246086 Length = 1280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 INTFEGV 7 INTF G+ Sbjct: 771 INTFSGL 777>XP_005270747 Length = 2025 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NTFEGV 7 NTF+G+ Sbjct: 1205 NTFQGI 1210>XP_006710574 Length = 2445 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NTFEGV 7 NTF+G+ Sbjct: 1625 NTFQGI 1630>XP_005270746 Length = 2443 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NTFEGV 7 NTF+G+ Sbjct: 1625 NTFQGI 1630>NP_036525 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 INTFEGVA 8 ++TF GVA Sbjct: 1105 LDTFRGVA 1112>NP_203528 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 INTFEGV 7 +NT+EG+ Sbjct: 396 LNTYEGL 402>NP_005764 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 INTFEGVAV 9 I TFE VAV Sbjct: 13 IVTFEDVAV 21Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.139 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 519,368 Number of extensions: 1507 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |