Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 509 XP_005267290 20 509 NP_055907 17 3301 XP_006726695 17 3301 XP_005255242 17 3301 XP_005255241 17 3301 XP_005255240 17 3301 XP_005255239 17 3301 NP_001275918 17 4312 NP_057425 17 4312 XP_006717952 17 4312 XP_006717951 17 4312 XP_006717950 17 4312 XP_006717949 17 4312 XP_006717948 17 4312 NP_001184033 16 5631 NP_005924 16 5631 XP_006718903 16 5631 XP_006718902 16 5631 NP_061885 16 7355 NP_001137378 16 7355 NP_006691 16 7355 NP_001243716 16 7355 NP_001243399 16 7355 NP_001137293 16 7355 XP_006719159 16 7355 XP_006719157 16 7355 XP_006719156 16 7355 XP_006719155 16 7355 XP_005253457 16 7355 XP_006719154 16 7355 XP_005253456 16 7355 XP_005253455 16 7355 XP_006719153 16 7355 XP_006719152 16 7355 XP_006717206 16 7355 XP_005252108 16 7355 NP_005383 16 7355 NP_001129599 15 9605 NP_037396 15 9605 XP_005271586 15 9605 XP_005245137 15 9605>NP_005091 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 INSVAEQDE 9 IN VAEQDE Sbjct: 65 INGVAEQDE 73>XP_005267290 Length = 1782 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 INSVAEQDE 9 IN VAEQDE Sbjct: 65 INGVAEQDE 73>NP_055907 Length = 3661 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 INSVAEQDE 9 INSVA+Q E Sbjct: 1107 INSVAQQAE 1115>XP_006726695 Length = 747 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 INSVAEQDE 9 INSVA+Q E Sbjct: 622 INSVAQQAE 630>XP_005255242 Length = 3609 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 INSVAEQDE 9 INSVA+Q E Sbjct: 1055 INSVAQQAE 1063>XP_005255241 Length = 3637 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 INSVAEQDE 9 INSVA+Q E Sbjct: 1055 INSVAQQAE 1063>XP_005255240 Length = 3663 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 INSVAEQDE 9 INSVA+Q E Sbjct: 1081 INSVAQQAE 1089>XP_005255239 Length = 3689 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 INSVAEQDE 9 INSVA+Q E Sbjct: 1107 INSVAQQAE 1115>NP_001275918 Length = 2286 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NSVAEQD 8 NSVAE+D Sbjct: 127 NSVAEED 133>NP_057425 Length = 2302 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NSVAEQD 8 NSVAE+D Sbjct: 127 NSVAEED 133>XP_006717952 Length = 2300 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NSVAEQD 8 NSVAE+D Sbjct: 127 NSVAEED 133>XP_006717951 Length = 2315 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NSVAEQD 8 NSVAE+D Sbjct: 127 NSVAEED 133>XP_006717950 Length = 2316 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NSVAEQD 8 NSVAE+D Sbjct: 127 NSVAEED 133>XP_006717949 Length = 2316 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NSVAEQD 8 NSVAE+D Sbjct: 127 NSVAEED 133>XP_006717948 Length = 2316 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NSVAEQD 8 NSVAE+D Sbjct: 127 NSVAEED 133>NP_001184033 Length = 3972 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 INSVAEQDE 9 INS E DE Sbjct: 2086 INSTVEHDE 2094>NP_005924 Length = 3969 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 INSVAEQDE 9 INS E DE Sbjct: 2083 INSTVEHDE 2091>XP_006718903 Length = 2673 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 INSVAEQDE 9 INS E DE Sbjct: 787 INSTVEHDE 795>XP_006718902 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 INSVAEQDE 9 INS E DE Sbjct: 1078 INSTVEHDE 1086>NP_061885 Length = 1116 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1059 NSVDEQEE 1066>NP_001137378 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NSVAEQD 8 +SVAEQD Sbjct: 255 SSVAEQD 261>NP_006691 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NSVAEQD 8 +SVAEQD Sbjct: 255 SSVAEQD 261>NP_001243716 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1041 NSVDEQEE 1048>NP_001243399 Length = 1282 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1225 NSVDEQEE 1232>NP_001137293 Length = 1174 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1117 NSVDEQEE 1124>XP_006719159 Length = 1276 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1219 NSVDEQEE 1226>XP_006719157 Length = 1128 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1071 NSVDEQEE 1078>XP_006719156 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1094 NSVDEQEE 1101>XP_006719155 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1116 NSVDEQEE 1123>XP_005253457 Length = 1179 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1122 NSVDEQEE 1129>XP_006719154 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1140 NSVDEQEE 1147>XP_005253456 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1149 NSVDEQEE 1156>XP_005253455 Length = 1218 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1161 NSVDEQEE 1168>XP_006719153 Length = 1224 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1167 NSVDEQEE 1174>XP_006719152 Length = 1236 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSVAEQDE 9 NSV EQ+E Sbjct: 1179 NSVDEQEE 1186>XP_006717206 Length = 1062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INSVAEQDE 9 +N+VA DE Sbjct: 418 VNTVASSDE 426>XP_005252108 Length = 1097 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INSVAEQDE 9 +N+VA DE Sbjct: 453 VNTVASSDE 461>NP_005383 Length = 1096 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INSVAEQDE 9 +N+VA DE Sbjct: 453 VNTVASSDE 461>NP_001129599 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SVAEQDE 9 SVAE DE Sbjct: 626 SVAENDE 632>NP_037396 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INSVAEQDE 9 IN++ E DE Sbjct: 47 INNINEDDE 55>XP_005271586 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 INSVAEQDE 9 IN++ E DE Sbjct: 47 INNINEDDE 55>XP_005245137 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SVAEQDE 9 SVAE DE Sbjct: 636 SVAENDE 642Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.112 0.259 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 498,639 Number of extensions: 659 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |