Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 19 665 NP_060240 17 3301 NP_068586 17 4312 NP_001229757 17 4312 XP_005249324 17 4312 XP_005249323 17 4312 NP_073563 16 5631 NP_001098028 16 5631 NP_079206 16 5631 XP_005248664 16 5631 XP_005248663 16 5631 XP_006714758 16 5631 NP_004659 16 7355 XP_006716232 16 7355 XP_006716231 16 7355 NP_996991 15 9605 NP_001273093 15 9605 NP_004310 15 9605 NP_001161807 15 9605 NP_002387 15 9605 NP_060147 15 9605 NP_064593 15 9605 NP_001271279 15 9605 XP_005265293 15 9605 NP_071800 15 9605 NP_001025190 15 9605 NP_689995 15 9605>NP_000312 Length = 928 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 IMM SMYGI Sbjct: 703 IMMCSMYGI 711>NP_060240 Length = 296 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 I+M+S YG+ Sbjct: 181 ILMYSYYGL 189>NP_068586 Length = 299 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 ++M+S YG+ Sbjct: 178 VLMYSYYGL 186>NP_001229757 Length = 326 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 ++M+S YG+ Sbjct: 205 VLMYSYYGL 213>XP_005249324 Length = 299 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 ++M+S YG+ Sbjct: 178 VLMYSYYGL 186>XP_005249323 Length = 299 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 ++M+S YG+ Sbjct: 178 VLMYSYYGL 186>NP_073563 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 ++M+S YG+ Sbjct: 193 VIMYSYYGL 201>NP_001098028 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 ++M+S YG+ Sbjct: 182 VVMYSYYGL 190>NP_079206 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 ++M+S YG+ Sbjct: 182 VVMYSYYGL 190>XP_005248664 Length = 268 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 ++M+S YG+ Sbjct: 169 VVMYSYYGL 177>XP_005248663 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 ++M+S YG+ Sbjct: 182 VVMYSYYGL 190>XP_006714758 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 ++M+S YG+ Sbjct: 182 VVMYSYYGL 190>NP_004659 Length = 1857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 +M FS++GI Sbjct: 1541 MMEFSLFGI 1549>XP_006716232 Length = 2753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 +M FS++GI Sbjct: 1541 MMEFSLFGI 1549Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 +M FS++GI Sbjct: 2437 MMEFSLFGI 2445>XP_006716231 Length = 2753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 +M FS++GI Sbjct: 1541 MMEFSLFGI 1549Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 +M FS++GI Sbjct: 2437 MMEFSLFGI 2445>NP_996991 Length = 1216 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 I MF+++G+ Sbjct: 1119 IYMFTLWGV 1127>NP_001273093 Length = 1228 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 I MF+++G+ Sbjct: 1119 IYMFTLWGV 1127>NP_004310 Length = 1294 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 IMMFSMYGI 9 I MF+++G+ Sbjct: 1119 IYMFTLWGV 1127>NP_001161807 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IMMFSMYGI 9 I MF YG+ Sbjct: 341 IWMFDKYGL 349>NP_002387 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 IMMFSMYGI 9 I MF YG+ Sbjct: 341 IWMFDKYGL 349>NP_060147 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 FSMYGI 9 F+MYG+ Sbjct: 478 FTMYGV 483>NP_064593 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IMMFSMYG 8 I+ FS+YG Sbjct: 292 IVTFSIYG 299>NP_001271279 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FSMYGI 9 FS+YGI Sbjct: 272 FSVYGI 277>XP_005265293 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IMMFSMYG 8 I+ FS+YG Sbjct: 292 IVTFSIYG 299>NP_071800 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IMMFSMYG 8 I+ FS+YG Sbjct: 255 IVTFSIYG 262>NP_001025190 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FSMYGI 9 FS+YGI Sbjct: 284 FSVYGI 289>NP_689995 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FSMYGI 9 FS+YGI Sbjct: 284 FSVYGI 289Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.353 0.154 0.464 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 329,345 Number of extensions: 521 Number of successful extensions: 29 Number of sequences better than 10000.0: 27 Number of HSP's gapped: 29 Number of HSP's successfully gapped: 29 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |