Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_006718908 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_055907 19 665 XP_005255242 19 665 XP_005255241 19 665 XP_005255240 19 665 XP_005255239 19 665 NP_001175 18 1935 NP_808881 17 2528 NP_056028 16 5631 NP_001230183 16 5631 NP_004455 16 5631 XP_006718232 16 5631 XP_005252889 16 5631 NP_570853 16 7355 NP_570854 16 7355 NP_000453 16 7355 NP_689571 16 7355 NP_002194 16 7355 NP_065828 16 7355 XP_006723071 16 7355 XP_006723070 16 7355 XP_005268328 16 7355 XP_006720739 16 7355 XP_005268327 16 7355 XP_005268326 16 7355 XP_005268324 16 7355 XP_005268325 16 7355 XP_006720738 16 7355 XP_006720737 16 7355 XP_006720736 16 7355 XP_005248044 16 7355 NP_000284 15 9605 NP_001027005 15 9605 NP_002926 15 9605 NP_006728 15 9605 NP_001924 15 9605 NP_001229796 15 9605 NP_116038 15 9605 XP_005256041 15 9605 XP_005256040 15 9605 NP_060906 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 I GVEGVFR Sbjct: 2920 ITGVEGVFR 2928>XP_006718908 Length = 1708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 I GVEGVFR Sbjct: 1572 ITGVEGVFR 1580>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 I GVEGVFR Sbjct: 2572 ITGVEGVFR 2580>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 I GVEGVFR Sbjct: 2914 ITGVEGVFR 2922>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 I GVEGVFR Sbjct: 2920 ITGVEGVFR 2928>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 I GVEGVFR Sbjct: 2920 ITGVEGVFR 2928>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 I GVEGVFR Sbjct: 2920 ITGVEGVFR 2928>NP_055907 Length = 3661 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 + GVEGVFR Sbjct: 2385 VTGVEGVFR 2393>XP_005255242 Length = 3609 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 + GVEGVFR Sbjct: 2333 VTGVEGVFR 2341>XP_005255241 Length = 3637 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 + GVEGVFR Sbjct: 2361 VTGVEGVFR 2369>XP_005255240 Length = 3663 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 + GVEGVFR Sbjct: 2387 VTGVEGVFR 2395>XP_005255239 Length = 3689 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 + GVEGVFR Sbjct: 2413 VTGVEGVFR 2421>NP_001175 Length = 2644 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MGVEGVFR 9 MG EG+FR Sbjct: 2526 MGTEGLFR 2533>NP_808881 Length = 609 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GVEGVFR 9 G+EGVFR Sbjct: 369 GLEGVFR 375>NP_056028 Length = 1287 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 ++GVE VF+ Sbjct: 292 LLGVENVFQ 300>NP_001230183 Length = 1241 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 ++GVE VF+ Sbjct: 292 LLGVENVFQ 300>NP_004455 Length = 268 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IMGVEGVF 8 I+G+ GVF Sbjct: 130 IVGIRGVF 137>XP_006718232 Length = 1263 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 ++GVE VF+ Sbjct: 268 LLGVENVFQ 276>XP_005252889 Length = 1307 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IMGVEGVFR 9 ++GVE VF+ Sbjct: 292 LLGVENVFQ 300>NP_570853 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 618 LMGKKGTFR 626>NP_570854 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 638 LMGKKGTFR 646>NP_000453 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 641 LMGKKGTFR 649>NP_689571 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IMGVEGVF 8 +MG+EG F Sbjct: 57 LMGMEGPF 64>NP_002194 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 I+G +G FR Sbjct: 604 ILGSDGAFR 612>NP_065828 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IMGVEGVF 8 + GV+GVF Sbjct: 448 VRGVKGVF 455>XP_006723071 Length = 214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IMGVEGVF 8 +MG+EG F Sbjct: 57 LMGMEGPF 64>XP_006723070 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IMGVEGVF 8 +MG+EG F Sbjct: 57 LMGMEGPF 64>XP_005268328 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 618 LMGKKGTFR 626>XP_006720739 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 618 LMGKKGTFR 626>XP_005268327 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 618 LMGKKGTFR 626>XP_005268326 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 618 LMGKKGTFR 626>XP_005268324 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 618 LMGKKGTFR 626>XP_005268325 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 618 LMGKKGTFR 626>XP_006720738 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 618 LMGKKGTFR 626>XP_006720737 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 638 LMGKKGTFR 646>XP_006720736 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMGVEGVFR 9 +MG +G FR Sbjct: 638 LMGKKGTFR 646>XP_005248044 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IMGVEGVF 8 + GV+GVF Sbjct: 298 VRGVKGVF 305>NP_000284 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGVEGVFR 9 M ++GVFR Sbjct: 372 MMIDGVFR 379>NP_001027005 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGVEGVFR 9 M ++GVFR Sbjct: 365 MMIDGVFR 372>NP_002926 Length = 160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 IMGVEG 6 +MGVEG Sbjct: 18 LMGVEG 23>NP_006728 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GVEGVF 8 G+EGVF Sbjct: 450 GLEGVF 455>NP_001924 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 IMGVEGVF 8 I+G+ G+F Sbjct: 393 ILGMHGIF 400>NP_001229796 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GVEGVF 8 G+EGVF Sbjct: 433 GLEGVF 438>NP_116038 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 IMGVEGVF 8 I G+EG F Sbjct: 349 IHGIEGAF 356>XP_005256041 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGVEGVFR 9 M ++GVFR Sbjct: 365 MMIDGVFR 372>XP_005256040 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGVEGVFR 9 M ++GVFR Sbjct: 372 MMIDGVFR 379>NP_060906 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 MGVEGVFR 9 +G++GV R Sbjct: 66 LGIQGVIR 73Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.159 0.466 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 510,850 Number of extensions: 1024 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |