Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 21 229 NP_858045 21 229 NP_006525 21 229 NP_001167559 21 229 NP_001008395 17 2528 NP_036474 17 2528 NP_000262 16 7355 NP_008944 16 7355 NP_542402 16 7355 XP_006722542 16 7355 XP_005258336 16 7355 XP_005258335 16 7355 XP_005258334 16 7355 XP_005250818 16 7355 XP_005250817 16 7355 NP_072088 16 7355 NP_001842 15 9605 NP_001035203 15 9605 NP_074035 15 9605 NP_001035202 15 9605 NP_002465 15 9605 NP_002464 15 9605 NP_002968 15 9605 NP_001273148 15 9605 NP_001242941 15 9605 NP_004935 15 9605 NP_057062 15 9605 NP_001139281 15 9605 NP_005955 15 9605 NP_001070654 15 9605 NP_443139 15 9605 NP_001032961 15 9605 NP_079005 15 9605 NP_057400 15 9605 NP_001106279 15 9605 NP_001243024 15 9605 XP_006723449 15 9605 XP_005256710 15 9605 XP_005256709 15 9605 XP_005256708 15 9605 XP_006719284 15 9605 XP_006719283 15 9605 XP_006719282 15 9605 XP_005246814 15 9605 XP_006712656 15 9605 XP_005264025 15 9605 XP_006712655 15 9605>NP_001167558 Length = 1423 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MEPMNSNS 9 MEPMNSNS Sbjct: 930 MEPMNSNS 937>NP_858045 Length = 1424 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MEPMNSNS 9 MEPMNSNS Sbjct: 930 MEPMNSNS 937>NP_006525 Length = 1420 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MEPMNSNS 9 MEPMNSNS Sbjct: 930 MEPMNSNS 937>NP_001167559 Length = 1415 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MEPMNSNS 9 MEPMNSNS Sbjct: 925 MEPMNSNS 932>NP_001008395 Length = 333 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IMEPMNSN 8 I+EPMN N Sbjct: 282 ILEPMNVN 289>NP_036474 Length = 260 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 IMEPMNSNS 9 +++P NSNS Sbjct: 55 LLDPQNSNS 63>NP_000262 Length = 1278 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MEPMNS 7 MEPMN+ Sbjct: 217 MEPMNN 222>NP_008944 Length = 922 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IMEPMNSNS 9 I+EP SNS Sbjct: 310 ILEPDTSNS 318>NP_542402 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MEPMNS 7 MEP+NS Sbjct: 55 MEPLNS 60>XP_006722542 Length = 1273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MEPMNS 7 MEPMN+ Sbjct: 217 MEPMNN 222>XP_005258336 Length = 1286 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MEPMNS 7 MEPMN+ Sbjct: 217 MEPMNN 222>XP_005258335 Length = 1295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MEPMNS 7 MEPMN+ Sbjct: 217 MEPMNN 222>XP_005258334 Length = 1303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 MEPMNS 7 MEPMN+ Sbjct: 217 MEPMNN 222>XP_005250818 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IMEPMNSNS 9 I+EP SNS Sbjct: 309 ILEPDTSNS 317>XP_005250817 Length = 922 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IMEPMNSNS 9 I+EP SNS Sbjct: 310 ILEPDTSNS 318>NP_072088 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MEPMNSNS 9 + P+NSNS Sbjct: 353 LPPVNSNS 360>NP_001842 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PMNSNS 9 P+NSNS Sbjct: 32 PVNSNS 37>NP_001035203 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 603 MDPLNDN 609>NP_074035 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 596 MDPLNDN 602>NP_001035202 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 603 MDPLNDN 609>NP_002465 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 596 MDPLNDN 602>NP_002464 Length = 1960 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 589 MDPLNDN 595>NP_002968 Length = 1977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EPMNSN 8 EPMNS+ Sbjct: 1133 EPMNSD 1138>NP_001273148 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EPMNSN 8 EPMNS+ Sbjct: 524 EPMNSS 529>NP_001242941 Length = 2007 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 606 MDPLNDN 612>NP_004935 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMEPMNSNS 9 +ME +N NS Sbjct: 71 LMEKLNRNS 79>NP_057062 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMEPMNSNS 9 +M P +SNS Sbjct: 728 LMSPASSNS 736>NP_001139281 Length = 2036 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 623 MDPLNDN 629>NP_005955 Length = 1976 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 596 MDPLNDN 602>NP_001070654 Length = 2003 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 623 MDPLNDN 629>NP_443139 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EPMNSN 8 EPMNS+ Sbjct: 1012 EPMNSS 1017>NP_001032961 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IMEPMNSNS 9 I EP SNS Sbjct: 992 IPEPQESNS 1000>NP_079005 Length = 1995 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 615 MDPLNDN 621>NP_057400 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IMEPMNSNS 9 I EP SNS Sbjct: 993 IPEPQESNS 1001>NP_001106279 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IMEPMNSNS 9 +M P +SNS Sbjct: 842 LMSPASSNS 850>NP_001243024 Length = 1985 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 605 MDPLNDN 611>XP_006723449 Length = 2003 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 623 MDPLNDN 629>XP_005256710 Length = 1986 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 606 MDPLNDN 612>XP_005256709 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 596 MDPLNDN 602>XP_005256708 Length = 2007 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 MEPMNSN 8 M+P+N N Sbjct: 606 MDPLNDN 612>XP_006719284 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EPMNSN 8 EPMNS+ Sbjct: 610 EPMNSS 615>XP_006719283 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EPMNSN 8 EPMNS+ Sbjct: 902 EPMNSS 907>XP_006719282 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EPMNSN 8 EPMNS+ Sbjct: 902 EPMNSS 907>XP_005246814 Length = 1988 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EPMNSN 8 EPMNS+ Sbjct: 1144 EPMNSD 1149>XP_006712656 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IMEPMNSNS 9 I EP SNS Sbjct: 503 IPEPQESNS 511>XP_005264025 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IMEPMNSNS 9 I EP SNS Sbjct: 923 IPEPQESNS 931>XP_006712655 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 IMEPMNSNS 9 I EP SNS Sbjct: 993 IPEPQESNS 1001Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.112 0.292 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 662,123 Number of extensions: 1100 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |